RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 IFRD2Q12894 506 aaPredicted RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 SPARCL1Q14515 664 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 DSC3Q14574 896 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 KCNJ11Q14654 390 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FASTKD3Q14CZ7 662 aaKnown RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 TIGD5Q53EQ6 642 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 LGSNQ5TDP6 509 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FAXCQ5TGI0 409 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 HHATQ5VTY9 493 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 LHX8Q68G74 356 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FOXR1Q6PIV2 292 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 DCLRE1AQ6PJP8 1040 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 KCNT2Q6UVM3 1135 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 EXOC3L1Q86VI1 746 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 DCP1BQ8IZD4 617 aaKnown RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 CCNYQ8ND76 341 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 GDAP1Q8TB36 358 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 CCDC110Q8TBZ0 833 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 ATXN2LQ8WWM7 1075 aaKnown RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 RTP4Q96DX8 246 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 SLC9A7Q96T83 725 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 NPY6RQ99463 290 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 ACBD6Q9BR61 282 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FTHL17Q9BXU8 183 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 IQCGQ9H095 443 aaKnown RBP11.13□□□□□ -0.63
SPIDR-204ENST00000517824 ACSS3Q9H6R3 686 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.13□□□□□ -0.637e-6■■■■□ 20.5
SPIDR-204ENST00000517824 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 GGA2Q9UJY4 613 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 LRFN2Q9ULH4 789 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 PCDHB8Q9UN66 801 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 FAM169AQ9Y6X4 670 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 NUP205Q92621 2012 aa11.13□□□□□ -0.63
SPIDR-204ENST00000517824 PRUNE2Q8WUY3 3088 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 A0A0A0MRY4 1105 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 MYBPHLA2RUH7 354 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 E7ESA3 106 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 H0YHG0 523 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 RNF103O00237 685 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 MTSS1O43312 755 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 MFSD11O43934 449 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 MGEA5O60502 916 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 OPHN1O60890 802 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 BANF1O75531 89 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 GABBR2O75899 941 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 MAP3K6O95382 1288 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 EOMESO95936 686 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 CYP11A1P05108 521 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 USP17L7P0C7H9 530 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 TPSB2P20231 275 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 CA4P22748 312 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 ELK3P41970 407 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 BRCC3P46736 316 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 ATXN1P54253 815 aaKnown RBP11.12□□□□□ -0.63
SPIDR-204ENST00000517824 COG7P83436 770 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 GBE1Q04446 702 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 YWHAHQ04917 246 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-204ENST00000517824 BFSP2Q13515 415 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 TPSAB1Q15661 275 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 NOMO2Q5JPE7 1267 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 FNBP1LQ5T0N5 605 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 NCBP2-AS2Q69YL0 99 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 CASC4Q6P4E1 433 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 C3orf62Q6ZUJ4 267 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 RFX8Q6ZV50 586 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 CTAGE3PQ8IX95 158 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 FBF1Q8TES7 1133 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 HTR3CQ8WXA8 447 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 RSPH1Q8WYR4 309 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.637e-14■■■■□ 21.1
SPIDR-204ENST00000517824 NTAN1Q96AB6 310 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 LRRC39Q96DD0 335 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 SUSD3Q96L08 255 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 PAFAH2Q99487 392 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 SMOQ99835 787 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 PLCD4Q9BRC7 762 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 C11orf84Q9BUA3 381 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-204ENST00000517824 ARHGEF4Q9NR80 690 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 KLHL8Q9P2G9 620 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-204ENST00000517824 ZC3H7BQ9UGR2 993 aaKnown RBP11.12□□□□□ -0.63
SPIDR-204ENST00000517824 MAD1L1Q9Y6D9 718 aa11.12□□□□□ -0.63
SPIDR-204ENST00000517824 FNDC1Q4ZHG4 1894 aaPredicted RBP11.12□□□□□ -0.63
SPIDR-204ENST00000517824 GREB1Q4ZG55 1949 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 SCN5AQ14524 2016 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 DOCK4Q8N1I0 1966 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 C9IYK1 514 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 DLL1O00548 723 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 NCAM2O15394 837 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 GCATO75600 419 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 NEBLO76041 1014 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 BEST1O76090 585 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 ZWINTO95229 277 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 NEFHP12036 1026 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 CKBP12277 381 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 MX2P20592 715 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 BDNFP23560 247 aa11.11□□□□□ -0.63
SPIDR-204ENST00000517824 SSTR1P30872 391 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 495.4 ms