RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LMO3Q8TAP4 145 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 PBXIP1Q96AQ6 731 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 CDCA5Q96FF9 252 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 DCUN1D1Q96GG9 259 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 TRAPPC9Q96Q05 1148 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 IL1RL2Q9HB29 575 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 BCORQ6W2J9 1755 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 MYH1P12882 1939 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 MYH4Q9Y623 1939 aa11.14□□□□□ -0.63
PCDHGA1-202ENST00000517417 MTSS1O43312 755 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 FKBP6O75344 327 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 LSM8O95777 96 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 OAS1P00973 400 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ADORA2AP29274 412 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 RPL22P35268 128 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 GRIK4Q16099 956 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 TDRD10Q5VZ19 366 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZNF483Q8TF39 744 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PPP2R3CQ969Q6 453 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 HIC2Q96JB3 615 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 CHST12Q9NRB3 414 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 DNAJC16Q9Y2G8 782 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ACKR2O00590 384 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZNF197O14709 1029 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PSMD3O43242 534 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 SEC24DO94855 1032 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ITGAVP06756 1048 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 AVPR1AP37288 418 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ADCYAP1R1P41586 468 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 SGO1Q5FBB7 561 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 DDX53Q86TM3 631 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 TDRPQ86YL5 185 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 POU5F2Q8N7G0 328 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ADAM32Q8TC27 787 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 CMTM5Q96DZ9 223 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 MFSD14AQ96MC6 490 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 IL1RAPL1Q9NZN1 696 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PRKAG3Q9UGI9 489 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 DOCK2Q92608 1830 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 TMEM247A6NEH6 219 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 GPR182O15218 404 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 HIST1H2AGP0C0S8 130 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 HIST1H2ADP20671 130 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 TKTL1P51854 596 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 CYTH1Q15438 398 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 RINLQ6ZS11 566 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 RIPOR1Q6ZS17 1223 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 MON1BQ7L1V2 547 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PHF13Q86YI8 300 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 UCMAQ8WVF2 138 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 C7orf43Q8WVR3 580 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 NRBF2Q96F24 287 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 HIST1H2AHQ96KK5 128 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 KCNK16Q96T55 309 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 HIST1H2AJQ99878 128 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 H2AFJQ9BTM1 129 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 FAM192AQ9GZU8 254 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 DYRK4Q9NR20 520 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 KCNK4Q9NYG8 393 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 LACTBL1A8MY62 500 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 IRF6O14896 467 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 GSTT1P30711 240 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ATN1P54259 1190 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PDK2Q15119 407 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZRANB3Q5FWF4 1079 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 CWF19L1Q69YN2 538 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PTRHD1Q6GMV3 140 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PLEKHO2Q8TD55 490 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 TSPAN17Q96FV3 270 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 RUBCNLQ9H714 662 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 MRPL40Q9NQ50 206 aaKnown RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 PKP3Q9Y446 797 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 ADGRA2Q96PE1 1338 aa11.13□□□□□ -0.63
PCDHGA1-202ENST00000517417 SDR42E2A6NKP2 422 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 ANPEPP15144 967 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 UBA1P22314 1058 aaKnown RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 PTPN7P35236 360 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 ALDH1A3P47895 512 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 PTP4A2Q12974 167 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 VGLL4Q14135 290 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 SIX1Q15475 284 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 MAPRE1Q15691 268 aaKnown RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 CRY2Q49AN0 593 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 NIPA1Q7RTP0 329 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 STKLD1Q8NE28 680 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 NMD3Q96D46 503 aaKnown RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 CELF6Q96J87 481 aaKnown RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 MRPL1Q9BYD6 325 aaKnown RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 KLHL4Q9C0H6 718 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 PCDHB7Q9Y5E2 793 aa11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
PCDHGA1-202ENST00000517417 SUPT3HB4E1H0 165 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms