RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 TGM5O43548 720 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 WNT1P04628 370 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 KCNA3P22001 575 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 PPIFP30405 207 aaKnown RBP-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 GKP32189 559 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 SELENOVP59797 346 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 CDK17Q00537 523 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 CFHR3Q02985 330 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZBTB16Q05516 673 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 TCF15Q12870 199 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 DLG1Q12959 904 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 MYBPHQ13203 477 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 MTA1Q13330 715 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 PGM5Q15124 567 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZFP69Q49AA0 526 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 FSCBQ5H9T9 825 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 DEPDC1Q5TB30 811 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 DCAF12L2Q5VW00 463 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 HMBOX1Q6NT76 420 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 PTCHD4Q6ZW05 846 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF114Q8NC26 417 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 OR2I1PQ8NGU4 316 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 GABPB2Q8TAK5 448 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 TSPEARQ8WU66 669 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 CENPIQ92674 756 aaPredicted RBP-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 USP7Q93009 1102 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 SCAMP4Q969E2 229 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 ST6GALNAC6Q969X2 333 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 CYFIP2Q96F07 1278 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 CDC6Q99741 560 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 PKP2Q99959 881 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 SYT11Q9BT88 431 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 SELENOOQ9BVL4 669 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 SORBS1Q9BX66 1292 aaKnown RBP-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 MAGEH1Q9H213 219 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 IFT122Q9HBG6 1241 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 SAMD15Q9P1V8 674 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 GABBR1Q9UBS5 961 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 B4GALT6Q9UBX8 382 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 RASAL2Q9UJF2 1139 aa-0.45□□□□□ -2.48
RNU6-539P-201ENST00000516665 IGHV4OR15-8A0A075B7B6 117 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 MBD3L4A6NDZ8 208 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 MBD3L3A6NE82 208 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 MBD3L5A6NJ08 208 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 TCERG1O14776 1098 aaKnown RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 FYB1O15117 783 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 LIASO43766 372 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 LRP3O75074 770 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 PMPCBO75439 489 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 ENDOD1O94919 500 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 CSF1RP07333 972 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 PRSS1P07477 247 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 PRB4P10163 310 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 TFEBP19484 476 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 IDUAP35475 653 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 RANGAP1P46060 587 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 AMTP48728 403 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 FANCCQ00597 558 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 ADRM1Q16186 407 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 TNNI3KQ59H18 835 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 GJC2Q5T442 439 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 HIBCHQ6NVY1 386 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF613Q6PF04 617 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 USP49Q70CQ1 688 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 PPP1R32Q7Z5V6 425 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 DDIASQ8IXT1 998 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 Q8N377 158 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 CELF2-AS1Q8N7Q2 184 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 CNBD1Q8NA66 436 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 DDX55Q8NHQ9 600 aaKnown RBP eCLIP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 MBD3L2Q8NHZ7 208 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 PHF10Q8WUB8 498 aaKnown RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 HERVK_113Q902F9 699 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 CTHRC1Q96CG8 243 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 EDC3Q96F86 508 aaKnown RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 CNOT6LQ96LI5 555 aaKnown RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 MCRIP2Q9BUT9 160 aaKnown RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 CNPPD1Q9BV87 410 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 SPAG4Q9NPE6 437 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 ST7Q9NRC1 585 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 DPP7Q9UHL4 492 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 KIF25-AS1Q9Y6Z4 181 aa-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF335Q9H4Z2 1342 aaPredicted RBP-0.46□□□□□ -2.48
RNU6-539P-201ENST00000516665 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 GAGE12JA6NER3 117 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF785A8K8V0 405 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 FAM220BPB1ANY3 271 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ERVV-1B6SEH8 477 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 DCLK1O15075 740 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ANXA1P04083 346 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 CETPP11597 493 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ATP2A2P16615 1042 aaKnown RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ADORA2AP29274 412 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ITGAEP38570 1179 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF135P52742 658 aaPredicted RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 PSMC1P62191 440 aaKnown RBP-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 ATP2B3Q16720 1220 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 TRIM61Q5EBN2 209 aa-0.47□□□□□ -2.48
RNU6-539P-201ENST00000516665 CT83Q5H943 113 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms