RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SAMSN1Q9NSI8 373 aaKnown RBP2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CATSPERZQ9NTU4 200 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MARCH5Q9NX47 278 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 RAB20Q9NX57 234 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ERVK13-1Q9NX77 482 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MIOSQ9NXC5 875 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CLDND1Q9NY35 253 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SPG21Q9NZD8 308 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GCNT4Q9P109 453 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CHD7Q9P2D1 2997 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GULP1Q9UBP9 304 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TUBGCP4Q9UGJ1 667 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SFMBT1Q9UHJ3 866 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEFF2Q9UIK5 374 aaPredicted RBP2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SIX4Q9UIU6 781 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 GPR160Q9UJ42 338 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MSRAQ9UJ68 235 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 TMEM59LQ9UK28 342 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 ADAM28Q9UKQ2 775 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 DSEQ9UL01 958 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MAFFQ9ULX9 164 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 MYO6Q9UM54 1294 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 CNTN6Q9UQ52 1028 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 SSX2IPQ9Y2D8 614 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 FAN1Q9Y2M0 1017 aa2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 COA3Q9Y2R0 106 aaPredicted RBP2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PDCD11Q14690 1871 aaKnown RBP2.34□□□□□ -2.03
SCARNA16.3-201ENST00000516595 PTPRJQ12913 1337 aa2.34□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ITIH6Q6UXX5 1313 aa2.34□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CEP290O15078 2479 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FNDC1Q4ZHG4 1894 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PTPRSQ13332 1948 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LCHNA4D1U4 455 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C7orf72A4D263 438 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FITM1A5D6W6 292 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CASTOR2A6NHX0 329 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OR6C75A6NL08 312 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KPNA7A9QM74 516 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 C22orf46C9J442 243 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 H3BNC9 293 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 H7C4K7 107 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NRP1O14786 923 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PPEF2O14830 753 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GSTA4O15217 222 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TBC1D4O60343 1298 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 B4GALT3O60512 393 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PSPNO60542 156 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HUS1O60921 280 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 DNAJC6O75061 913 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FGF18O76093 207 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 B3GAT3O94766 335 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CRTAMO95727 393 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SERPINC1P01008 464 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HLA-DRAP01903 254 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SOD2P04179 222 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ALDH2P05091 517 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ITGB3P05106 788 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 SCG5P05408 212 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ITGB1P05556 798 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 URODP06132 367 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 POU2F2P09086 479 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZGLP1P0C6A0 271 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CTSAP10619 480 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ODC1P11926 461 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ATP1A3P13637 1013 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 UCHL3P15374 230 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PRKCAP17252 672 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 NAT1P18440 290 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRIM21P19474 475 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CDK11BP21127 795 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 FUT4P22083 530 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 WARSP23381 471 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PON1P27169 355 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ANXA13P27216 316 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PCSK1P29120 753 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 HNRNPH3P31942 346 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TRHRP34981 398 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 CTNNB1P35222 781 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ARL4AP40617 200 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 BCL6P41182 706 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 PIK3CAP42336 1068 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KIR2DL1P43626 348 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KIR2DL2P43627 348 aaPredicted RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MTIF2P46199 727 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 OR1G1P47890 313 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GCLMP48507 274 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 LHX1P48742 406 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ALDH7A1P49419 539 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GLUD2P49448 558 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 GATMP50440 423 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ZNF132P52740 706 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 COPB1P53618 953 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 ERVFC1P60507 584 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 MYL6P60660 151 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 YWHAEP62258 255 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TFAMQ00059 246 aaKnown RBP2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 TAP1Q03518 808 aa2.33□□□□□ -2.04
SCARNA16.3-201ENST00000516595 KRT17Q04695 432 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms