RNA–Protein interactions for RNA: ENST00000515460.5

NUP54-218, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-218ENST00000515460 MOV10L1Q9BXT6 1211 aaKnown RBP5.9□□□□□ -1.46
NUP54-218ENST00000515460 SEZ6LQ9BYH1 1024 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 RPAP3Q9H6T3 665 aaPredicted RBP5.9□□□□□ -1.46
NUP54-218ENST00000515460 ATP6V0A4Q9HBG4 840 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 DDX20Q9UHI6 824 aaKnown RBP5.9□□□□□ -1.46
NUP54-218ENST00000515460 SERPINB13Q9UIV8 391 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 USP18Q9UMW8 372 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 MAPRE3Q9UPY8 281 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 GMEB1Q9Y692 573 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 IKBKGQ9Y6K9 419 aa5.9□□□□□ -1.46
NUP54-218ENST00000515460 A0A0A6YYK5 440 aaPredicted RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 EME2A4GXA9 379 aaPredicted RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 GSG1L2A8MUP6 293 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 TMEM232C9JQI7 657 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 GAAP10253 952 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 MYCLP1P12525 358 aaPredicted RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 CYBAP13498 195 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 IDO1P14902 403 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 EZRP15311 586 aaKnown RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 DESP17661 470 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 GNAT2P19087 354 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ADORA2AP29274 412 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 OAS2P29728 719 aaKnown RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 CNGA1P29973 690 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ADCYAP1R1P41586 468 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 RANBP1P43487 201 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 NEK2P51955 445 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ZNF132P52740 706 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 CCNA1P78396 465 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ZBED6P86452 979 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 TLE2Q04725 743 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 KRTAP1-1Q07627 177 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 MPP3Q13368 585 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 DYNC1I2Q13409 638 aaKnown RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 COG2Q14746 738 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 CNGA3Q16281 694 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ZBTB41Q5SVQ8 909 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 PRAMEF19Q5SWL8 479 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 FAAH2Q6GMR7 532 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 CEP85Q6P2H3 762 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 SLC30A9Q6PML9 568 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 CEP112Q8N8E3 955 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 GAB3Q8WWW8 586 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 TAF4BQ92750 862 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 USP7Q93009 1102 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 MPP4Q96JB8 637 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ZNF512Q96ME7 567 aaPredicted RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 NAP1L3Q99457 506 aaPredicted RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 SOX7Q9BT81 388 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 TSGA10Q9BZW7 698 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 TRIM4Q9C037 500 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 LRRCC1Q9C099 1032 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 KIF9Q9HAQ2 790 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 IFT122Q9HBG6 1241 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 RABL2AQ9UBK7 228 aaPredicted RBP5.89□□□□□ -1.47
NUP54-218ENST00000515460 NRBP1Q9UHY1 535 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 TMED5Q9Y3A6 229 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 PHIPQ8WWQ0 1821 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 RLFQ13129 1914 aa5.89□□□□□ -1.47
NUP54-218ENST00000515460 ERICH2A1L162 156 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 DNM1LO00429 736 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 STRNO43815 780 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 KDM1AO60341 852 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 ALDH1A2O94788 518 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 PROS1P07225 676 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 CYP2D6P10635 497 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 MCM3P25205 808 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 LMAN1P49257 510 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 NSUN2Q08J23 767 aaKnown RBP eCLIP5.88□□□□□ -1.47
NUP54-218ENST00000515460 PLCB4Q15147 1175 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 Q4G0T1 1027 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 PLEKHG4Q58EX7 1191 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 SLC9C2Q5TAH2 1124 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 C20orf194Q5TEA3 1177 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 ANO1Q5XXA6 986 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 NUGGCQ68CJ6 796 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 PCSK4Q6UW60 755 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 ZNF365Q70YC5 407 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 DPP9Q86TI2 863 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 CXorf67Q86X51 503 aaPredicted RBP5.88□□□□□ -1.47
NUP54-218ENST00000515460 GLB1L2Q8IW92 636 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 NUP133Q8WUM0 1156 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 SLC25A43Q8WUT9 341 aaPredicted RBP5.88□□□□□ -1.47
NUP54-218ENST00000515460 TEKT4Q8WW24 435 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 ARNTL2Q8WYA1 636 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 HAS1Q92839 578 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 SLC5A5Q92911 643 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 GTF3C6Q969F1 213 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 DYNLL2Q96FJ2 89 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 MNTQ99583 582 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 JPH2Q9BR39 696 aaPredicted RBP5.88□□□□□ -1.47
NUP54-218ENST00000515460 UPF3BQ9BZI7 483 aaKnown RBP5.88□□□□□ -1.47
NUP54-218ENST00000515460 SPATC1LQ9H0A9 340 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 EPC1Q9H2F5 836 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 EMC7Q9NPA0 242 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 PDRG1Q9NUG6 133 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 TBC1D7Q9P0N9 293 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 C6orf203Q9P0P8 240 aaPredicted RBP5.88□□□□□ -1.47
NUP54-218ENST00000515460 EXOC6BQ9Y2D4 811 aa5.88□□□□□ -1.47
NUP54-218ENST00000515460 NOC2LQ9Y3T9 749 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms