RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 REPS2Q8NFH8 660 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 NMUR2Q9GZQ4 415 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 PORCNQ9H237 461 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
PRDM16-208ENST00000514189 DONSONQ9NYP3 566 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 PKD2L2Q9NZM6 624 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 TRIM13O60858 407 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 CFHP08603 1231 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 THPOP40225 353 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 ZNF268Q14587 947 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-208ENST00000514189 PRAMEF19Q5SWL8 479 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 SCIMPQ6UWF3 145 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 RIPOR1Q6ZS17 1223 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 ILDR2Q71H61 639 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 GSTCDQ8NEC7 633 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 VCPIP1Q96JH7 1222 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 PRDM12Q9H4Q4 367 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 CAB39LQ9H9S4 337 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 CPA4Q9UI42 421 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 LRCH1Q9Y2L9 728 aa13.4□□□□□ -0.26
PRDM16-208ENST00000514189 PRR5-ARHGAP8B1AHC4 643 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 SMAPO00193 183 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 RGL2O15211 777 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 ZNF862O60290 1169 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 PSMG1O95456 288 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 CCR1P32246 355 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 ARHGAP8P85298 464 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 PDK4Q16654 411 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 CPXM1Q96SM3 734 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 ECSITQ9BQ95 431 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 BEGAINQ9BUH8 593 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 GPR63Q9BZJ6 419 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 THAP1Q9NVV9 213 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 CYP39A1Q9NYL5 469 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 GOT1P17174 413 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 FDFT1P37268 417 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 PEX5P50542 639 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 TRMT5Q32P41 509 aaKnown RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 HELQQ8TDG4 1101 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 CACYBPQ9HB71 228 aaKnown RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 EXOSC4Q9NPD3 245 aaKnown RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 ETNK2Q9NVF9 386 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 hCG_1818297A0A087WSY0 165 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 CLDN5O00501 218 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 KATNA1O75449 491 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 SERPIND1P05546 499 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 PSMC3P17980 439 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 AKT1P31749 480 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 GP5P40197 560 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 POU4F1Q01851 419 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 STX5Q13190 355 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 DMC1Q14565 340 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 TMEM132BQ14DG7 1078 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 ASTE1Q2TB18 679 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 BNIPLQ7Z465 357 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 TTC7BQ86TV6 843 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 SLC44A2Q8IWA5 706 aaPredicted RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 ALLCQ8N6M5 410 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 MRPL40Q9NQ50 206 aaKnown RBP13.39□□□□□ -0.27
PRDM16-208ENST00000514189 C2CD2Q9Y426 696 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 UBIAD1Q9Y5Z9 338 aa13.39□□□□□ -0.27
PRDM16-208ENST00000514189 NCANO14594 1321 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SNHG28P0DPA3 235 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SCNN1BP51168 640 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SNAPC2Q13487 334 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 KYQ8NBH2 561 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PIWIL2Q8TC59 973 aaKnown RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 WDR55Q9H6Y2 383 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 GOLGA2P5Q9HBQ8 144 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 INPP4BO15327 924 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SLC25A27O95847 323 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 TCF4P15884 667 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SERPINB8P50452 374 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 KCNK10P57789 538 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SLC45A4Q5BKX6 768 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 VWA5B1Q5TIE3 1220 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 RNF219Q5W0B1 726 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 KCNMB4Q86W47 210 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SLC9A9Q8IVB4 645 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 MICU2Q8IYU8 434 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 MSL3Q8N5Y2 521 aaKnown RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 TMEM79Q9BSE2 394 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PNPOQ9NVS9 261 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PAPSS1O43252 624 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 TIMM44O43615 452 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 EDF1O60869 148 aaKnown RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 SERPINE1P05121 402 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PTPRAP18433 802 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
PRDM16-208ENST00000514189 GBE1Q04446 702 aa13.38□□□□□ -0.27
PRDM16-208ENST00000514189 FAM83AQ86UY5 434 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms