RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 SCN3BQ9NY72 215 aa16.52■□□□□ 0.23
TRIO-221ENST00000513206 CCDC130P13994 396 aa16.52■□□□□ 0.23
TRIO-221ENST00000513206 TERB1Q8NA31 727 aa16.52■□□□□ 0.23
TRIO-221ENST00000513206 PEAK1Q9H792 1746 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 ITGALP20701 1170 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 PTPN11Q06124 597 aaPredicted RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 TRIP10Q15642 601 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 MIER2Q8N344 545 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 TC2NQ8N9U0 490 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 TSPAN16Q9UKR8 245 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 SERPINB5P36952 375 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 ALDH9A1P49189 494 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 LRRC8DQ7L1W4 858 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 ZNF410Q86VK4 478 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 B3GALNT2Q8NCR0 500 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 DMAP1Q9NPF5 467 aaPredicted RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 NCOA3Q9Y6Q9 1424 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 YWHAQP27348 245 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 VGLL4Q14135 290 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 NOA1Q8NC60 698 aaKnown RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 WHRNQ9P202 907 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 LSM1O15116 133 aaKnown RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 NR2C2P49116 596 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 NUDT2P50583 147 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 POLR2LP62875 67 aaKnown RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 CAMKK2Q96RR4 588 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 OMDQ99983 421 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 TRIM49D1C9J1S8 452 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 SYT15Q9BQS2 421 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 TBC1D13Q9NVG8 400 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 GTF3C4Q9UKN8 822 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 R3HDM2Q9Y2K5 976 aaKnown RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 F8VZ95 297 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 PSMA3P25788 255 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 PPATQ06203 517 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 TRIM74Q86UV6 250 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 TRIM73Q86UV7 250 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 SLC13A5Q86YT5 568 aaPredicted RBP16.51■□□□□ 0.23
TRIO-221ENST00000513206 SCUBE3Q8IX30 993 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 CNBD2Q96M20 576 aa16.51■□□□□ 0.23
TRIO-221ENST00000513206 RBM22Q9NW64 420 aaKnown RBP eCLIP16.51■□□□□ 0.233e-6■■□□□ 14.1
TRIO-221ENST00000513206 USP17L7P0C7H9 530 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 PSMA4P25789 261 aaKnown RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 AXLP30530 894 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 SETMARQ53H47 684 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 MARC1Q5VT66 337 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 IQSEC1Q6DN90 963 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 CACUL1Q86Y37 369 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 OR2W6PQ8NHA6 318 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 SPG21Q9NZD8 308 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 JCHAINP01591 159 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 FNTAP49354 379 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 RENBPP51606 427 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 BEX3Q00994 111 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 MAPK7Q13164 816 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 PTAR1Q7Z6K3 402 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 OSCP1Q8WVF1 389 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 BMP10O95393 424 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 POLR2EP19388 210 aaKnown RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 GLT6D1Q7Z4J2 308 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 ATG4AQ8WYN0 398 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 SERPINB12Q96P63 405 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 RMND5AQ9H871 391 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 RPS6KB2Q9UBS0 482 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 PRR23D1E9PI22 279 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 MSCO60682 206 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 SERPINF2P08697 491 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 PRR23D2P0DMB1 279 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 HSPA13P48723 471 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 INHBEP58166 350 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 SLC27A1Q6PCB7 646 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 FAM43BQ6ZT52 329 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIO-221ENST00000513206 RIOX1Q9H6W3 641 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 C2CD2Q9Y426 696 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 A0A087X0T9 212 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 FAM228BP0C875 321 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 OTUD4Q01804 1114 aaKnown RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 CNTN2Q02246 1040 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 ISCUQ9H1K1 167 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 NFKBIL1Q9UBC1 381 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 FZD1Q9UP38 647 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 ITGB6P18564 788 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 ATP4AP20648 1035 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 TARSP26639 723 aaKnown RBP16.5■□□□□ 0.23
TRIO-221ENST00000513206 DDX42Q86XP3 938 aaKnown RBP eCLIP16.5■□□□□ 0.23
TRIO-221ENST00000513206 ELOVL4Q9GZR5 314 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 WDR41Q9HAD4 459 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 SESN1Q9Y6P5 492 aa16.5■□□□□ 0.23
TRIO-221ENST00000513206 RRM2P31350 389 aa16.49■□□□□ 0.23
TRIO-221ENST00000513206 TUBP50607 506 aa16.49■□□□□ 0.23
TRIO-221ENST00000513206 OAZ1P54368 228 aa16.49■□□□□ 0.23
TRIO-221ENST00000513206 CENPLQ8N0S6 344 aaPredicted RBP16.49■□□□□ 0.23
TRIO-221ENST00000513206 FICDQ9BVA6 458 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms