RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 GKP32189 559 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 GDF5P43026 501 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 CCT8P50990 548 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 EEFSECP57772 596 aaKnown RBP4.8□□□□□ -1.64
HTT-210ENST00000512909 TIAL1Q01085 375 aaKnown RBP eCLIP4.8□□□□□ -1.64
HTT-210ENST00000512909 SEMA3BQ13214 749 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 L1TD1Q5T7N2 865 aaKnown RBP4.8□□□□□ -1.64
HTT-210ENST00000512909 LAIR1Q6GTX8 287 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 ABLIM2Q6H8Q1 611 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 ANKRD16Q6P6B7 361 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 TOM1L2Q6ZVM7 507 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 RHOUQ7L0Q8 258 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 SLC29A4Q7RTT9 530 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 PEG10Q86TG7 708 aaKnown RBP4.8□□□□□ -1.64
HTT-210ENST00000512909 FAM71DQ8N9W8 422 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 C3orf49Q96BT1 292 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 RSPRY1Q96DX4 576 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 ZSCAN31Q96LW9 406 aaPredicted RBP4.8□□□□□ -1.64
HTT-210ENST00000512909 PRRX2Q99811 253 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 NUDT22Q9BRQ3 303 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 TERF2IPQ9NYB0 399 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 DKK2Q9UBU2 259 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 XRN1Q8IZH2 1706 aaKnown RBP4.8□□□□□ -1.64
HTT-210ENST00000512909 TECPR2O15040 1411 aa4.8□□□□□ -1.64
HTT-210ENST00000512909 SBNO1A3KN83 1393 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 MAST3O60307 1309 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 ADM5C9JUS6 153 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 ACKR2O00590 384 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 DNPH1O43598 174 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 PMPCBO75439 489 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 ACTL6BO94805 426 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 TNFRSF6BO95407 300 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 MYCLP12524 364 aaPredicted RBP4.79□□□□□ -1.64
HTT-210ENST00000512909 C6P13671 934 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 ADRA1DP25100 572 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 SERPINF1P36955 418 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 AP2B1P63010 937 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 TMF1P82094 1093 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 E2F1Q01094 437 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 SP2Q02086 613 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 RNASELQ05823 741 aaKnown RBP4.79□□□□□ -1.64
HTT-210ENST00000512909 TRIM71Q2Q1W2 868 aaKnown RBP4.79□□□□□ -1.64
HTT-210ENST00000512909 TMEM63BQ5T3F8 832 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 DBX2Q6ZNG2 339 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 RAB11FIP2Q7L804 512 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 GALNT15Q8N3T1 639 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 HMGB4Q8WW32 186 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 CPT1BQ92523 772 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 GOLGA1Q92805 767 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 RTKNQ9BST9 563 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 TTPALQ9BTX7 342 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 DUSP26Q9BV47 211 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 KATNAL1Q9BW62 490 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 MAGEH1Q9H213 219 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 ELAC1Q9H777 363 aaKnown RBP4.79□□□□□ -1.64
HTT-210ENST00000512909 USP29Q9HBJ7 922 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 SAYSD1Q9NPB0 183 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 IGSF9Q9P2J2 1179 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 DKK3Q9UBP4 350 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 BAG5Q9UL15 447 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 RIMKLBQ9ULI2 386 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 DTNAQ9Y4J8 743 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 PPIP5K1Q6PFW1 1433 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 PRAG1Q86YV5 1406 aa4.79□□□□□ -1.64
HTT-210ENST00000512909 COL16A1Q07092 1604 aaPredicted RBP4.79□□□□□ -1.64
HTT-210ENST00000512909 AHDC1Q5TGY3 1603 aaPredicted RBP4.79□□□□□ -1.64
HTT-210ENST00000512909 NCANO14594 1321 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 NALCNQ8IZF0 1738 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 NRXN1Q9ULB1 1477 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 A0A087WZ62 844 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 A8MVJ9 347 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 TTC34A8MYJ7 566 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 NARSO43776 548 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 ITGA5P08648 1049 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 TACR2P21452 398 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 TGM1P22735 817 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 AARSP49588 968 aaKnown RBP eCLIP4.78□□□□□ -1.64
HTT-210ENST00000512909 PAPOLAP51003 745 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 SEC24CP53992 1094 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 CCDC15Q0P6D6 951 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 AARS2Q5JTZ9 985 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 TSTD2Q5T7W7 516 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 SULT6B1Q6IMI4 303 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 SERPINA13PQ6UXR4 307 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 Q6YL49 198 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 DPY19L3Q6ZPD9 716 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 PTCHD4Q6ZW05 846 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 Q6ZWC4 215 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 VRK3Q8IV63 474 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 REXO5Q96IC2 774 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 FAR2Q96K12 515 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 NAP1L4Q99733 375 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 SORBS1Q9BX66 1292 aaKnown RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 TAF1DQ9H5J8 278 aaPredicted RBP4.78□□□□□ -1.64
HTT-210ENST00000512909 CCDC134Q9H6E4 229 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 AS3MTQ9HBK9 375 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 KIF17Q9P2E2 1029 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 ADAMTS5Q9UNA0 930 aa4.78□□□□□ -1.64
HTT-210ENST00000512909 TNS3Q68CZ2 1445 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms