RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 LINC01599Q8WXQ3 324 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 MYLPFQ96A32 169 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 FAM149B1Q96BN6 582 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 TLCD1Q96CP7 247 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 FAM118BQ9BPY3 351 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 TMEM121Q9BTD3 319 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 FRMD8Q9BZ67 464 aaPredicted RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 CDC42EP4Q9H3Q1 356 aaKnown RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 DMAP1Q9NPF5 467 aaPredicted RBP13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 FZD10Q9ULW2 581 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 AP4E1Q9UPM8 1137 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 INPP5FQ9Y2H2 1132 aa13.61□□□□□ -0.23
DEPDC1B-206ENST00000512452 GVINP1Q7Z2Y8 2422 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 HHLA1C9JL84 531 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 SYN3O14994 580 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 BEST1O76090 585 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 ZBED1O96006 694 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 F9P00740 461 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 AGTP01019 485 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 PECAM1P16284 738 aaPredicted RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 IGFBP6P24592 240 aaPredicted RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 ARL4AP40617 200 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 LMAN1P49257 510 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 VPS41P49754 854 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 NUBP1P53384 320 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 SCAPQ12770 1279 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 MMRN1Q13201 1228 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CCDC142Q17RM4 750 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 PLEKHG4Q58EX7 1191 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 PM20D1Q6GTS8 502 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CCDC25Q86WR0 208 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 FAM126BQ8IXS8 530 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 ZMIZ2Q8NF64 920 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 OR2W6PQ8NHA6 318 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 PCDH19Q8TAB3 1148 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 GDPD5Q8WTR4 605 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 SEPT8Q92599 483 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 SERPINB12Q96P63 405 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CAPS2Q9BXY5 557 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 ULBP1Q9BZM6 244 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 NRDE2Q9H7Z3 1164 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CNOT10Q9H9A5 744 aaKnown RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 PAK5Q9P286 719 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 CACNG4Q9UBN1 327 aa13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 FARP1Q9Y4F1 1045 aaPredicted RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 TIMM13Q9Y5L4 95 aaPredicted RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 FASNP49327 2511 aaKnown RBP13.6□□□□□ -0.23
DEPDC1B-206ENST00000512452 HACD1B0YJ81 288 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 H3BRJ5 948 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 OAZ2O95190 189 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 IFNB1P01574 187 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 LTFP02788 710 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 CYP2F1P24903 491 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 ATP5DP30049 168 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 RPL22P35268 128 aaKnown RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 ACTN2P35609 894 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 CHKAP35790 457 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 MAGEA4P43358 317 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 BRCC3P46736 316 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 STAT4Q14765 748 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 RAB6CQ53S08 254 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 DCAF6Q58WW2 860 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 ZC3H12AQ5D1E8 599 aaKnown RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 TNFAIP8L3Q5GJ75 292 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 CLLU1OSQ5K130 101 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 DARS2Q6PI48 645 aaKnown RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 PPP1R21Q6ZMI0 780 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 CENPUQ71F23 418 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 ZNF771Q7L3S4 317 aaPredicted RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 SPRED2Q7Z698 418 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 COLGALT2Q8IYK4 626 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 DCP1BQ8IZD4 617 aaKnown RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 PRCCQ92733 491 aaPredicted RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 FAM193BQ96PV7 902 aaPredicted RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 RBM15Q96T37 977 aaKnown RBP eCLIP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 RAB6CQ9H0N0 254 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 DHX35Q9H5Z1 703 aaKnown RBP13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 NINJ2Q9NZG7 142 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 RAD54BQ9Y620 910 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 USP3Q9Y6I4 520 aa13.59□□□□□ -0.23
DEPDC1B-206ENST00000512452 MAP1BP46821 2468 aaKnown RBP13.58□□□□□ -0.23
DEPDC1B-206ENST00000512452 H7C0C1 242 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 M0QYT0 321 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 CAPN9O14815 690 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 RASGRF2O14827 1237 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 ALOX15BO15296 676 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 RGS16O15492 202 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 ZSCAN5DPP0CG00 497 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 TFE3P19532 575 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 MAGEA6P43360 314 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 ATP5OP48047 213 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 HCAR3P49019 387 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 CCL23P55773 120 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 ARL4CP56559 192 aa13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 YWHAHQ04917 246 aaPredicted RBP13.58□□□□□ -0.24
DEPDC1B-206ENST00000512452 DEUP1Q05D60 604 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms