RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CHST3Q7LGC8 479 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 ADCK1Q86TW2 530 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 RHOT2Q8IXI1 618 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 AADATQ8N5Z0 425 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 POC5Q8NA72 575 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 CHAMP1Q96JM3 812 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 GDAP1L1Q96MZ0 367 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 RAB3IPQ96QF0 476 aaPredicted RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 PIP5K1AQ99755 562 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 MOV10L1Q9BXT6 1211 aaKnown RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 MRPL46Q9H2W6 279 aaKnown RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 TP63Q9H3D4 680 aaPredicted RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 RC3H2Q9HBD1 1191 aaKnown RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 MAGEE1Q9HCI5 957 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 SARS2Q9NP81 518 aaKnown RBP6.55□□□□□ -1.36
CHD1-208ENST00000512392 ZNF212Q9UDV6 495 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 NUMBLQ9Y6R0 609 aa6.55□□□□□ -1.36
CHD1-208ENST00000512392 SYCE3A1L190 88 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 WDR46O15213 610 aaKnown RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 TNFSF14O43557 240 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 NPHS1O60500 1241 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 MPOP05164 745 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 POLR2MP0CAP2 368 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 ACTN1P12814 892 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 FDPSP14324 419 aaKnown RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 NCF1P14598 390 aaPredicted RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 RFC4P35249 363 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 CASP3P42574 277 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 CHIT1Q13231 466 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 PTK6Q13882 451 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 DGKDQ16760 1214 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 AOC3Q16853 763 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 AARDQ4LEZ3 155 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 ARL6IP4Q66PJ3 421 aaKnown RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 LRIG3Q6UXM1 1119 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 FAM83HQ6ZRV2 1179 aaPredicted RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 ARMCX2Q7L311 632 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 CCDC150Q8NCX0 1101 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 SUPT20HQ8NEM7 779 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 OR52K1Q8NGK4 314 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 OR56A3Q8NH54 315 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 DNAJB8Q8NHS0 232 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 GIMAP7Q8NHV1 300 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 SPACA9Q96E40 222 aaPredicted RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 EDC3Q96F86 508 aaKnown RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 NR1H4Q96RI1 486 aaPredicted RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 UHRF1Q96T88 793 aaPredicted RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 FAM118BQ9BPY3 351 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 TUBB6Q9BUF5 446 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 DPH1Q9BZG8 443 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 NACA2Q9H009 215 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 CYP39A1Q9NYL5 469 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 TMOD2Q9NZR1 351 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 CNIH4Q9P003 139 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 MTUS1Q9ULD2 1270 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 PTRH2Q9Y3E5 179 aaKnown RBP6.54□□□□□ -1.36
CHD1-208ENST00000512392 NAALAD2Q9Y3Q0 740 aa6.54□□□□□ -1.36
CHD1-208ENST00000512392 ARHGEF37A1IGU5 675 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PPEF2O14830 753 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PPP6R2O75170 966 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 ALDH1A2O94788 518 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SLITRK3O94933 977 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 DIRAS3O95661 229 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 CSF2RAP15509 400 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 GNL1P36915 607 aaPredicted RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 METAP1P53582 386 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 EPHB4P54760 987 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TUBB4BP68371 445 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 RBM6P78332 1123 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 PMP22Q01453 160 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 POU4F1Q01851 419 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TARDBPQ13148 414 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD1-208ENST00000512392 TUBB2AQ13885 445 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PCLAFQ15004 111 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PKN1Q16512 942 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 MYLK3Q32MK0 819 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 GLE1Q53GS7 698 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 PRSS36Q5K4E3 855 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 ANO7Q6IWH7 933 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PTCHD4Q6ZW05 846 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 ZAR1Q86SH2 424 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 POU5F2Q8N7G0 328 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 RASSF8Q8NHQ8 419 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 KBTBD7Q8WVZ9 684 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 RAPGEF5Q92565 580 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 GATA6Q92908 595 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 MRGPRX4Q96LA9 322 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 PSMG3-AS1Q96PY0 264 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 CDK5RAP1Q96SZ6 601 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 RBM15Q96T37 977 aaKnown RBP eCLIP6.53□□□□□ -1.36
CHD1-208ENST00000512392 TUBB2BQ9BVA1 445 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SLC5A7Q9GZV3 580 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 IL1RAPL2Q9NP60 686 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 DDX4Q9NQI0 724 aaKnown RBP6.53□□□□□ -1.36
CHD1-208ENST00000512392 QPCTLQ9NXS2 382 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 TBC1D7Q9P0N9 293 aa6.53□□□□□ -1.36
CHD1-208ENST00000512392 SRRDQ9UH36 339 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms