RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 ENDOD1O94919 500 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PSMG1O95456 288 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 TRUB2O95900 331 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 CLPTM1O96005 669 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 THPOP40225 353 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 RAD51Q06609 339 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 SLC1A5Q15758 541 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PTPN20Q4JDL3 420 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 CRELD2Q6UXH1 353 aaPredicted RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 TFAP2DQ7Z6R9 452 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PIWIL2Q8TC59 973 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 CDRT15Q96T59 188 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 ACO2Q99798 780 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 UBE2OQ9C0C9 1292 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 MRGBPQ9NV56 204 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 IRAK4Q9NWZ3 460 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 APPL1Q9UKG1 709 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 IGKV6D-41A0A0C4DH26 115 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 TRDMT1O14717 391 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 NPM3O75607 178 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 ODC1P11926 461 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 YBX3P16989 372 aaKnown RBP eCLIP8.26□□□□□ -1.09
NEK1-208ENST00000512193 PSMC3P17980 439 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PSMB4P28070 264 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PTDSS1P48651 473 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 PKNOX1P55347 436 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 DAB2P98082 770 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 SLC27A1Q6PCB7 646 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 FITM2Q8N6M3 262 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 EFCAB3Q8N7B9 438 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 OR52K1Q8NGK4 314 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 LRRC39Q96DD0 335 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 VPS50Q96JG6 964 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PIF1Q9H611 641 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PTPRHQ9HD43 1115 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 DMAC2Q9NW81 257 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 KCNK4Q9NYG8 393 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 SLC13A4Q9UKG4 626 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PCDHGB4Q9UN71 923 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 ERI2A8K979 691 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 A8MUI8 341 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 TPP1O14773 563 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 SPTLC1O15269 473 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 ADCYAP1R1P41586 468 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 NR2C2P49116 596 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 EFEMP1Q12805 493 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 CDH17Q12864 832 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 OASLQ15646 514 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 EML3Q32P44 896 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 MFSD5Q6N075 450 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 FAM117BQ6P1L5 589 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 JADE3Q92613 823 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 APBB2Q92870 758 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PPP1R2P1Q96PQ5 205 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 ECSITQ9BQ95 431 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 THUMPD3Q9BV44 507 aaKnown RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 RNPEPQ9H4A4 650 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 NRDE2Q9H7Z3 1164 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 PRDM5Q9NQX1 630 aaPredicted RBP8.26□□□□□ -1.09
NEK1-208ENST00000512193 LMCD1Q9NZU5 365 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 MOSPD1Q9UJG1 213 aa8.26□□□□□ -1.09
NEK1-208ENST00000512193 MYH10P35580 1976 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 MYO1GB0I1T2 1018 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 NR5A2O00482 541 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 UBDO15205 165 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ZNF862O60290 1169 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 FKBP9O95302 570 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 PIGNO95427 931 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 HIST1H2AGP0C0S8 130 aaPredicted RBP8.25□□□□□ -1.09
NEK1-208ENST00000512193 RAG1P15918 1043 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 CHRNB2P17787 502 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 PGAM1P18669 254 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 HIST1H2ADP20671 130 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 PEX5P50542 639 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 HUNKP57058 714 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 PRKAA1Q13131 559 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 XRCC4Q13426 336 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ZNF470Q6ECI4 717 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 CATSPERGQ6ZRH7 1159 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ZBTB49Q6ZSB9 765 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 FKBP9P1Q75LS8 142 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 GDPD5Q8WTR4 605 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 SNRNP27Q8WVK2 155 aaKnown RBP8.25□□□□□ -1.09
NEK1-208ENST00000512193 PPP2R3CQ969Q6 453 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 OPTNQ96CV9 577 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 HIST1H2AHQ96KK5 128 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 DACH2Q96NX9 599 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ZNF184Q99676 751 aaPredicted RBP8.25□□□□□ -1.09
NEK1-208ENST00000512193 HIST1H2AJQ99878 128 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 H2AFJQ9BTM1 129 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ULBP1Q9BZM6 244 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 PRDM12Q9H4Q4 367 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 NMRAL1Q9HBL8 299 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 MAN1C1Q9NR34 630 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 GRHL1Q9NZI5 618 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 SPATA31C2B4DYI2 1134 aa8.25□□□□□ -1.09
NEK1-208ENST00000512193 ADM5C9JUS6 153 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms