RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 KCNJ12Q14500 433 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 MAPRE1Q15691 268 aaKnown RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 ZSCAN23Q3MJ62 389 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 FYB2Q5VWT5 728 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 HS2ST1Q7LGA3 356 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 SPATS2Q86XZ4 545 aaKnown RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 NT5DC4Q86YG4 428 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 MYCT1Q8N699 235 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 PDZD8Q8NEN9 1154 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 MRPL45Q9BRJ2 306 aaKnown RBP9.62□□□□□ -0.87
NUP54-211ENST00000512151 THSD1Q9NS62 852 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 IL37Q9NZH6 218 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 SERGEFQ9UGK8 458 aa9.62□□□□□ -0.87
NUP54-211ENST00000512151 C10orf142B7Z368 130 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 MDM4O15151 490 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 YKT6O15498 198 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 SDC3O75056 442 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 RTN3O95197 1032 aaPredicted RBP9.61□□□□□ -0.87
NUP54-211ENST00000512151 RXRGP48443 463 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 ZNF131P52739 623 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 RBP5P82980 135 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 GTF2BQ00403 316 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 POU5F1Q01860 360 aaKnown RBP9.61□□□□□ -0.87
NUP54-211ENST00000512151 GRIN1Q05586 938 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 HYIQ5T013 277 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 SERPINA13PQ6UXR4 307 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 BRSK2Q8IWQ3 736 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 UCMAQ8WVF2 138 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 SAAL1Q96ER3 474 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 MTMR12Q9C0I1 747 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 GZF1Q9H116 711 aaPredicted RBP9.61□□□□□ -0.87
NUP54-211ENST00000512151 GDF3Q9NR23 364 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 AASDHPPTQ9NRN7 309 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 OSER1Q9NX31 292 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 SEPT3Q9UH03 358 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 ITGA11Q9UKX5 1188 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 SATB2Q9UPW6 733 aa9.61□□□□□ -0.87
NUP54-211ENST00000512151 A0A1B0GVM2 712 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 FAM92AA1XBS5 289 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 FAM47DPA6NHR8 397 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 CDRT15L2A8MXV6 281 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 TLR5O60602 858 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 KLKB1P03952 638 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 PTPN1P18031 435 aaKnown RBP9.6□□□□□ -0.87
NUP54-211ENST00000512151 POU3F2P20265 443 aaPredicted RBP9.6□□□□□ -0.87
NUP54-211ENST00000512151 CD38P28907 300 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 DDIT3P35638 169 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 ARRB1P49407 418 aaPredicted RBP9.6□□□□□ -0.87
NUP54-211ENST00000512151 SLC5A3P53794 718 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 GALCP54803 685 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 FOXK1P85037 733 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 C3orf38Q5JPI3 329 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 NCEH1Q6PIU2 408 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 IGF2-ASQ6U949 168 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 PAQR9Q6ZVX9 377 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 DPH6Q7L8W6 267 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 ANKS1BQ7Z6G8 1248 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 KRI1Q8N9T8 703 aaKnown RBP9.6□□□□□ -0.87
NUP54-211ENST00000512151 FAM184AQ8NB25 1140 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 CYB5D2Q8WUJ1 264 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 HPDLQ96IR7 371 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 SLC46A1Q96NT5 459 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 DEPDC7Q96QD5 511 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 CCNL2Q96S94 520 aaPredicted RBP9.6□□□□□ -0.87
NUP54-211ENST00000512151 FAM213AQ9BRX8 229 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 CIPCQ9C0C6 399 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 ELOVL4Q9GZR5 314 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 NACA2Q9H009 215 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 EPN3Q9H201 632 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 TMEM245Q9H330 911 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 MTG2Q9H4K7 406 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 SGK2Q9HBY8 427 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 PRSS16Q9NQE7 514 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.6□□□□□ -0.87
NUP54-211ENST00000512151 KCND2Q9NZV8 630 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 NUDT5Q9UKK9 219 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 FBN2P35556 2912 aa9.6□□□□□ -0.87
NUP54-211ENST00000512151 LY6G6EA0A0G2JKS1 128 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 TLR4O00206 839 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 SYT1P21579 422 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 GNL1P36915 607 aaPredicted RBP9.59□□□□□ -0.87
NUP54-211ENST00000512151 TOB1P50616 345 aaPredicted RBP9.59□□□□□ -0.87
NUP54-211ENST00000512151 PKP1Q13835 747 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 SKIDA1Q1XH10 827 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 TMEM119Q4V9L6 283 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 SLFN12LQ6IEE8 588 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 ZC3H3Q8IXZ2 948 aaKnown RBP9.59□□□□□ -0.87
NUP54-211ENST00000512151 SLC25A45Q8N413 288 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 FBXO18Q8NFZ0 1043 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 OR5B17Q8NGF7 314 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 POMGNT1Q8WZA1 660 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 C8orf76Q96K31 380 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 SEMA3CQ99985 751 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 OSBPL2Q9H1P3 480 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 ODF2LQ9ULJ1 636 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 U3KQA8 63 aa9.59□□□□□ -0.87
NUP54-211ENST00000512151 GOLGA8IPA6NC78 632 aa9.58□□□□□ -0.88
NUP54-211ENST00000512151 GOLGA8JA6NMD2 632 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms