RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CCL15Q16663 113 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ATPAF1Q5TC12 328 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RRAGBQ5VZM2 374 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPRYD7Q5W111 196 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CHST3Q7LGC8 479 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TADA2BQ86TJ2 420 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 DDX53Q86TM3 631 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CDH24Q86UP0 819 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMEM200AQ86VY9 491 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ERO1BQ86YB8 467 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TBC1D10CQ8IV04 446 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF444Q8N0Y2 327 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 NAV1Q8NEY1 1877 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 HUS1BQ8NHY5 278 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF671Q8TAW3 534 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF507Q8TCN5 953 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 URGCPQ8TCY9 931 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ACER1Q8TDN7 264 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SDCCAG3Q96C92 435 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 FAM120BQ96EK7 910 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRPM7Q96QT4 1865 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CDK5RAP2Q96SN8 1893 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 UHRF1Q96T88 793 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 COQ7Q99807 217 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 EDEM2Q9BV94 578 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRIM62Q9BVG3 475 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPZ1Q9BXG8 430 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 EPN3Q9H201 632 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 EHD4Q9H223 541 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RHBGQ9H310 441 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 EPS8L2Q9H6S3 715 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ERVMER34-1Q9H9K5 563 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CABP5Q9NP86 173 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 STX8Q9UNK0 236 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 HPS5Q9UPZ3 1129 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 POMT1Q9Y6A1 747 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 MYH1P12882 1939 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 PAPPA2Q9BXP8 1791 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RNF103-CHMP3A0A140T963 221 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 A0A1W2PRV1 198 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC9B1P1A6NJY1 282 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 AGAP14A8MT82 685 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 H3BML4 177 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RNF103O00237 685 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SH2B2O14492 632 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRDMT1O14717 391 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 APOL1O14791 398 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TACC1O75410 805 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TNFRSF6BO95407 300 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ASNSP08243 561 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 UBTFL6P0CB48 400 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GCFC2P16383 781 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 HTR1BP28222 390 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GP5P40197 560 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CETN2P41208 172 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 BUD31P41223 144 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CCR3P51677 355 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF41P51814 821 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SEC24CP53992 1094 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ARF5P84085 180 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 KDSRQ06136 332 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GABPAQ06546 454 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ASPHQ12797 758 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 NOGQ13253 232 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 KCNAB2Q13303 367 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RCN2Q14257 317 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CLEC16AQ2KHT3 1053 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC35G1Q2M3R5 365 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 CYP27C1Q4G0S4 372 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 UBXN11Q5T124 520 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 MIS18BP1Q6P0N0 1132 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ERICH5Q6P6B1 374 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMTC3Q6ZXV5 915 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GLRX5Q86SX6 157 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 COMTD1Q86VU5 262 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 NKAIN4Q8IVV8 208 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 FBXW8Q8N3Y1 598 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GSTCDQ8NEC7 633 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 OR6J1Q8NGC5 347 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF483Q8TF39 744 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RIN2Q8WYP3 895 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 INPP5DQ92835 1189 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 FEM1CQ96JP0 617 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TBC1D32Q96NH3 1257 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 NUP85Q9BW27 656 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRIM2Q9C040 744 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 ABCG8Q9H221 673 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 A1CFQ9NQ94 594 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 GDAP2Q9NXN4 497 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 SAMD15Q9P1V8 674 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 USP36Q9P275 1121 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 MBD1Q9UIS9 605 aaPredicted RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 RBM8AQ9Y5S9 174 aaKnown RBP5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 PIAS3Q9Y6X2 628 aa5.22□□□□□ -1.57
TRAPPC11-208ENST00000511955 C15orf38-AP3S2A0A0A6YYH1 394 aa5.21□□□□□ -1.58
TRAPPC11-208ENST00000511955 LOC100653049A0A140TA62 436 aa5.21□□□□□ -1.58
TRAPPC11-208ENST00000511955 TCRBV16S1A1N1A0A5B0 115 aa5.21□□□□□ -1.58
TRAPPC11-208ENST00000511955 B4E1Z4 1266 aa5.21□□□□□ -1.58
TRAPPC11-208ENST00000511955 PTGES3LE9PB15 166 aa5.21□□□□□ -1.58
TRAPPC11-208ENST00000511955 IGF2BP3O00425 579 aaKnown RBP eCLIP5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms