RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 UGT3A1Q6NUS8 523 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 NSMFQ6X4W1 530 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 RNF207Q6ZRF8 634 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 TMEM26Q6ZUK4 368 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 KCTD20Q7Z5Y7 419 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ZC3H7AQ8IWR0 971 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CCDC33Q8N5R6 958 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ANKRD49Q8WVL7 239 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CALML4Q96GE6 196 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF512BQ96KM6 892 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CCSER2Q9H7U1 834 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CYP4F11Q9HBI6 524 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SYTL2Q9HCH5 934 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PCSK1NQ9UHG2 260 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 DNAJC12Q9UKB3 198 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 BCORQ6W2J9 1755 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CROCCQ5TZA2 2017 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ATAD5Q96QE3 1844 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 NHSL1Q5SYE7 1610 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 A0A1B0GUL6 1792 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 LTN1O94822 1766 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CLDN25C9JDP6 229 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SNPHO15079 494 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 GCATO75600 419 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SERPINA6P08185 405 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 MCF2P10911 925 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 BGNP21810 368 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 NAMPTP43490 491 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 MLLT10P55197 1068 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 COX10Q12887 443 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PTK6Q13882 451 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF846Q147U1 533 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 MAPRE1Q15691 268 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PXDC1Q5TGL8 231 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CES4AQ5XG92 561 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ZCCHC8Q6NZY4 707 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 FOXR2Q6PJQ5 311 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PLEKHG7Q6ZR37 379 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 CHSY1Q86X52 802 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 ZNF354CQ86Y25 554 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 LILRA2Q8N149 483 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 FBXW8Q8N3Y1 598 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 KCTD17Q8N5Z5 321 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 TGFBRAP1Q8WUH2 860 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 TTC9Q92623 222 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SLC5A5Q92911 643 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SYT11Q9BT88 431 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 EMILIN2Q9BXX0 1053 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 NAA50Q9GZZ1 169 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 COPS7BQ9H9Q2 264 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 MAGEE1Q9HCI5 957 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 VAT1LQ9HCJ6 419 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PSMC3IPQ9P2W1 217 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 MAD2L2Q9UI95 211 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PACSIN3Q9UKS6 424 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SCAF8Q9UPN6 1271 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 TIAM2Q8IVF5 1701 aa7.53□□□□□ -1.2
CPNE4-208ENST00000511604 PHRF1Q9P1Y6 1649 aaKnown RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 SIPA1L3O60292 1781 aaPredicted RBP7.53□□□□□ -1.2
CPNE4-208ENST00000511604 USP17L3A6NCW0 530 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 USP17L4A6NCW7 530 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 TK2O00142 265 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 DYRK3O43781 588 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 DDAH1O94760 285 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 BCL10O95999 233 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 PRLP01236 227 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 CALCAP01258 141 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 CAPNS1P04632 268 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 NUDT1P36639 197 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 OPRL1P41146 370 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 COPAP53621 1224 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 SMARCB1Q12824 385 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 NME3Q13232 169 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 PEX6Q13608 980 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 DSC3Q14574 896 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 POU6F1Q14863 301 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 DRAP1Q14919 205 aaPredicted RBP7.52□□□□□ -1.21
CPNE4-208ENST00000511604 CARTPTQ16568 116 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 IGSF11Q5DX21 431 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 SNAP47Q5SQN1 464 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.52□□□□□ -1.21
CPNE4-208ENST00000511604 USP17L1Q7RTZ2 530 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 SIX6OS1Q8N1H7 587 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 PSD4Q8NDX1 1056 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 EPS8L1Q8TE68 723 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 FIG4Q92562 907 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 TRIM63Q969Q1 353 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 OMA1Q96E52 524 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 TARS2Q9BW92 718 aaKnown RBP7.52□□□□□ -1.21
CPNE4-208ENST00000511604 NANOGQ9H9S0 305 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 ATP13A2Q9NQ11 1180 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 GCNT4Q9P109 453 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 MAU2Q9Y6X3 613 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 KIF13BQ9NQT8 1826 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 C7orf72A4D263 438 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.52□□□□□ -1.21
CPNE4-208ENST00000511604 ERVH48-1M5A8F1 160 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 MTSS1O43312 755 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 SPAG6O75602 509 aa7.52□□□□□ -1.21
CPNE4-208ENST00000511604 ZSCAN5DPP0CG00 497 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms