RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CSDE1O75534 798 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 IPO13O94829 963 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CHRNB1P11230 501 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CDC27P30260 824 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 VIPR2P41587 438 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 SSR1P43307 286 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CCR10P46092 362 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ACOT2P49753 483 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 NCKAP1LP55160 1127 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 RAB15P59190 212 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 NOP14P78316 857 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 SATB1Q01826 763 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 DLX2Q07687 328 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 RAD51AP2Q09MP3 1159 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 NNTQ13423 1086 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ADAM9Q13443 819 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 NCAPHQ15003 741 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 SNRNP35Q16560 246 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 IFI16Q16666 785 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 BRMS1LQ5PSV4 323 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 N4BP2L1Q5TBK1 243 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 OR6B2Q6IFH4 312 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 LVRNQ6Q4G3 990 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 RBM44Q6ZP01 1051 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 TRAPPC11Q7Z392 1133 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 HEATR4Q86WZ0 1026 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 FAM98AQ8NCA5 519 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 DENND6BQ8NEG7 585 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 OR10G6Q8NH81 332 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 DHTKD1Q96HY7 919 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 SERAC1Q96JX3 654 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 RPRD1AQ96P16 312 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 GFM1Q96RP9 751 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 PHOX2BQ99453 314 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 LARP6Q9BRS8 491 aaKnown RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 TTYH3Q9C0H2 523 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ADNPQ9H2P0 1102 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 TMEM8AQ9HCN3 771 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 AGPAT4Q9NRZ5 378 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 MARCH5Q9NX47 278 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 FBXL12Q9NXK8 326 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 RLFQ13129 1914 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 A0A1B0GVL5 298 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CYP26A1O43174 497 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 TCEA3O75764 348 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ZBED1O96006 694 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CALB1P05937 261 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 KLK3P07288 261 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CCDC175P0C221 793 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 NPR3P17342 541 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 AGXTP21549 392 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 GTF2F1P35269 517 aaKnown RBP eCLIP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 NEK3P51956 506 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 KCNA1Q09470 495 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 TRA2AQ13595 282 aaKnown RBP eCLIP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 PRPSAP1Q14558 356 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF235Q14590 738 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 MAP9Q49MG5 647 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 XKR4Q5GH76 650 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 LY6G5CQ5SRR4 150 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 C6orf132Q5T0Z8 1188 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 UBXN11Q5T124 520 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 C20orf194Q5TEA3 1177 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 EEF1DP3Q658K8 133 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 FOXR1Q6PIV2 292 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF783Q6ZMS7 281 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ACOT1Q86TX2 421 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 FAM35AQ86V20 835 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 BPHLQ86WA6 291 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF276Q8N554 614 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 LINC01465Q8N7H1 131 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 IGSF22Q8N9C0 903 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 LINC01599Q8WXQ3 324 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 HSPH1Q92598 858 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 ZNF707Q96C28 371 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 RMDN1Q96DB5 314 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 GDAP1L1Q96MZ0 367 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CTAGE1Q96RT6 745 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 AGXT2Q9BYV1 514 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CLMPQ9H6B4 373 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 MMRN2Q9H8L6 949 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 MBD1Q9UIS9 605 aaPredicted RBP2.95□□□□□ -1.94
CLOCK-209ENST00000511124 VAV3Q9UKW4 847 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 WNT6Q9Y6F9 365 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 CSNK1G3Q9Y6M4 447 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 STON1Q9Y6Q2 735 aa2.95□□□□□ -1.94
CLOCK-209ENST00000511124 COL4A1P02462 1669 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PTPRFP10586 1907 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 A0A1B0GVM2 712 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 A6NCN8 305 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 GOLGA6L9A6NEM1 432 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 TCAF2A6NFQ2 919 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 METTL12A8MUP2 240 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 F8VP50 259 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 PCDHGA12O60330 932 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 ASMTLO95671 621 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 HOXB1P14653 301 aaPredicted RBP2.94□□□□□ -1.94
CLOCK-209ENST00000511124 NR2F2P24468 414 aa2.94□□□□□ -1.94
CLOCK-209ENST00000511124 CTNNA2P26232 953 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms