RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 POLBP06746 335 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 FAM163BP0C2L3 166 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 XBP1P17861 261 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 DRD4P21917 467 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 CNTFP26441 200 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 GRK5P34947 590 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 RBM5P52756 815 aaKnown RBP eCLIP6.29□□□□□ -1.4
CHD1-206ENST00000511067 FAM3BP58499 235 aaPredicted RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 RPL15P61313 204 aaKnown RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 CFHR3Q02985 330 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 CHRNDQ07001 517 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 TRPC3Q13507 836 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 SLC12A1Q13621 1099 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 DCTN1Q14203 1278 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 ZNF169Q14929 603 aaPredicted RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 ANKRD40Q6AI12 368 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 WDR93Q6P2C0 686 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 C16orf89Q6UX73 402 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 GRASPQ7Z6J2 395 aaPredicted RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 FSIP1Q8NA03 581 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 BEND2Q8NDZ0 799 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 EDC3Q96F86 508 aaKnown RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 MPP4Q96JB8 637 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 MAELQ96JY0 434 aaKnown RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 PIGSQ96S52 555 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 NPAS1Q99742 590 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 PRRX2Q99811 253 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 UNC45AQ9H3U1 944 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 TOR3AQ9H497 397 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 GGA3Q9NZ52 723 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 TRPC5Q9UL62 973 aaPredicted RBP6.29□□□□□ -1.4
CHD1-206ENST00000511067 PCDHB2Q9Y5E7 798 aa6.29□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3DA0A087WVF3 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3IA0A087WXS9 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3EA0A087X179 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3KA0A087X1G2 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3BA6NDS4 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3FA6NER0 549 aaPredicted RBP6.28□□□□□ -1.4
CHD1-206ENST00000511067 TMEM191CA6NGB0 347 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3LB9A6J9 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 PRRT4C9JH25 899 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 NPIPB8E9PQR5 432 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 M0QYT0 321 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TSPAN3O60637 253 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 MBPP02686 304 aaPredicted RBP6.28□□□□□ -1.4
CHD1-206ENST00000511067 CYP21A2P08686 494 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3HP0C7X1 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 CCR5P51681 352 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 JAK3P52333 1124 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 RNASE12Q5GAN4 147 aaKnown RBP6.28□□□□□ -1.4
CHD1-206ENST00000511067 PCID2Q5JVF3 399 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 HECTD2Q5U5R9 776 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3GQ6DHY5 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3CQ6IPX1 549 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 KIRREL2Q6UWL6 708 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 VRK3Q8IV63 474 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TBC1D3Q8IZP1 549 aaPredicted RBP6.28□□□□□ -1.4
CHD1-206ENST00000511067 ESX1Q8N693 406 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 PTGR2Q8N8N7 351 aaPredicted RBP6.28□□□□□ -1.4
CHD1-206ENST00000511067 PRR11Q96HE9 360 aaPredicted RBP6.28□□□□□ -1.4
CHD1-206ENST00000511067 TMPRSS5Q9H3S3 457 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 ABHD10Q9NUJ1 306 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 TMEM160Q9NX00 188 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 FZD4Q9ULV1 537 aa6.28□□□□□ -1.4
CHD1-206ENST00000511067 SPATA31A1Q5TZJ5 1347 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 J3KRW8 73 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 PRAMEF2O60811 474 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 HEXIM1O94992 359 aaKnown RBP6.27□□□□□ -1.41
CHD1-206ENST00000511067 C1RP00736 705 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 ELFN1P0C7U0 828 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 FPR3P25089 353 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 GALNSP34059 522 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 PCP4P48539 62 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 SOX10P56693 466 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 TAS2R50P59544 299 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 RAE1P78406 368 aaKnown RBP6.27□□□□□ -1.41
CHD1-206ENST00000511067 RNASELQ05823 741 aaKnown RBP6.27□□□□□ -1.41
CHD1-206ENST00000511067 ERCC6LQ2NKX8 1250 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 LAIR1Q6GTX8 287 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 CRIP3Q6Q6R5 217 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 SLC29A4Q7RTT9 530 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 TRMT61AQ96FX7 289 aaKnown RBP6.27□□□□□ -1.41
CHD1-206ENST00000511067 BBC3Q96PG8 261 aaPredicted RBP6.27□□□□□ -1.41
CHD1-206ENST00000511067 SEC62Q99442 399 aaKnown RBP6.27□□□□□ -1.41
CHD1-206ENST00000511067 USP29Q9HBJ7 922 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 UBN1Q9NPG3 1134 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 TFCP2L1Q9NZI6 479 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 RAB21Q9UL25 225 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 DNAJC16Q9Y2G8 782 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 ENTPD2Q9Y5L3 495 aa6.27□□□□□ -1.41
CHD1-206ENST00000511067 EPB41L2O43491 1005 aaKnown RBP6.26□□□□□ -1.41
CHD1-206ENST00000511067 ALDOAP04075 364 aaKnown RBP6.26□□□□□ -1.41
CHD1-206ENST00000511067 APEHP13798 732 aaKnown RBP6.26□□□□□ -1.41
CHD1-206ENST00000511067 IGFBP2P18065 325 aa6.26□□□□□ -1.41
CHD1-206ENST00000511067 RARRES1P49788 294 aa6.26□□□□□ -1.41
CHD1-206ENST00000511067 RCAN1P53805 252 aa6.26□□□□□ -1.41
CHD1-206ENST00000511067 FOXL2P58012 376 aa6.26□□□□□ -1.41
CHD1-206ENST00000511067 SIM1P81133 766 aaPredicted RBP6.26□□□□□ -1.41
CHD1-206ENST00000511067 DDX10Q13206 875 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms