RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 HS6ST3Q8IZP7 471 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 KRT222Q8N1A0 295 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MGARPQ8TDB4 240 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ULK4Q96C45 1275 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CHMP6Q96FZ7 201 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PCED1BQ96HM7 432 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 RILPQ96NA2 401 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 TRAIPQ9BWF2 469 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MINDY3Q9H8M7 445 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 OR12D3Q9UGF7 316 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 TRHDEQ9UKU6 1024 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PTPRJQ12913 1337 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MTA2O94776 668 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ESRRBO95718 433 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 POLBP06746 335 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CA3P07451 260 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CES1P23141 567 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PBX3P40426 434 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MATKP42679 507 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 THOP1P52888 689 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PDGFRLQ15198 375 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ARMC12Q5T9G4 340 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 C12orf29Q8N999 325 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 FAM71DQ8N9W8 422 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 TRPV1Q8NER1 839 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ABCB6Q9NP58 842 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ZFATQ9P243 1243 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 DRG1Q9Y295 367 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 SCN4AP35499 1836 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ZNF623O75123 536 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CLDN11O75508 207 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MMP13P45452 471 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 AARSP49588 968 aaKnown RBP eCLIP5.28□□□□□ -1.564e-6■■■■□ 24
PHF3-210ENST00000509876 HDAC4P56524 1084 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PUS10Q3MIT2 529 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 PHF13Q86YI8 300 aaPredicted RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 FAM126BQ8IXS8 530 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 TDHQ8IZJ6 230 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MIR1-1HGQ9H1L0 117 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 NRDE2Q9H7Z3 1164 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 LRRC40Q9H9A6 602 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 XAB2Q9HCS7 855 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 CYP4F8P98187 520 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 IL9RQ01113 521 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ILF2Q12905 390 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 TEAD4Q15561 434 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PLEKHG4Q58EX7 1191 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CHST9Q7L1S5 443 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 TBC1D1Q86TI0 1168 aaPredicted RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 WFIKKN2Q8TEU8 576 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CELF6Q96J87 481 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 ATP13A3Q9H7F0 1226 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ZDHHC4Q9NPG8 344 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PDLIM7Q9NR12 457 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.28□□□□□ -1.56
PHF3-210ENST00000509876 RBM22Q9NW64 420 aaKnown RBP eCLIP5.28□□□□□ -1.564e-6■□□□□ 10
PHF3-210ENST00000509876 INSL5Q9Y5Q6 135 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MRFAP1Q9Y605 127 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 BAZ2BQ9UIF8 2168 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 A0A087X0T9 212 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 GPC4O75487 556 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 FAM228BP0C875 321 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MSH3P20585 1137 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 HTR7P34969 479 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MRNIPQ6NTE8 343 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 LRRC8CQ8TDW0 803 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 SHC3Q92529 594 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 FICDQ9BVA6 458 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 POLR1EQ9GZS1 481 aaKnown RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 CDHR5Q9HBB8 845 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 AASDHPPTQ9NRN7 309 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CD207Q9UJ71 328 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 FBXO10Q9UK96 956 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 MBLAC1A4D2B0 266 aaPredicted RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 MYO1DO94832 1006 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 GDI1P31150 447 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 ADCY2Q08462 1091 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 RBBP7Q16576 425 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.28□□□□□ -1.563e-10■■■■■ 32.5
PHF3-210ENST00000509876 TRIM67Q6ZTA4 783 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 DNAJB7Q7Z6W7 309 aaPredicted RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 NT5DC3Q86UY8 548 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 PPIL6Q8IXY8 311 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 VAT1Q99536 393 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 FOXP3Q9BZS1 431 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 RNF39Q9H2S5 420 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 C20orf96Q9NUD7 363 aaPredicted RBP5.28□□□□□ -1.56
PHF3-210ENST00000509876 CLCA2Q9UQC9 943 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 CPQQ9Y646 472 aa5.28□□□□□ -1.56
PHF3-210ENST00000509876 HEATR9A2RTY3 570 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 PRPF4O43172 522 aaKnown RBP eCLIP5.27□□□□□ -1.57
PHF3-210ENST00000509876 RNF40O75150 1001 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 SPAG6O75602 509 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 ITIH2P19823 946 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 CCT5P48643 541 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
PHF3-210ENST00000509876 MTF1Q14872 753 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 PHLDB3Q6NSJ2 640 aa5.27□□□□□ -1.57
PHF3-210ENST00000509876 ANKS1BQ7Z6G8 1248 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms