RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 TFB1MQ8WVM0 346 aaKnown RBP15.39■□□□□ 0.05
PHF3-209ENST00000509330 AGAP3Q96P47 875 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 FOXP3Q9BZS1 431 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 WDCPQ9H6R7 721 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 RABGEF1Q9UJ41 708 aa15.39■□□□□ 0.05
PHF3-209ENST00000509330 TET1Q8NFU7 2136 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 BCLAF3A2AJT9 711 aaKnown RBP15.38■□□□□ 0.05
PHF3-209ENST00000509330 TADA2AO75478 443 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 TPI1P60174 286 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 RWDD4Q6NW29 188 aaKnown RBP15.38■□□□□ 0.05
PHF3-209ENST00000509330 DCLRE1AQ6PJP8 1040 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 CTAGE3PQ8IX95 158 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 VPS52Q8N1B4 723 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 HTR3CQ8WXA8 447 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 NT5C3BQ969T7 300 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 PAFAH2Q99487 392 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 COLEC11Q9BWP8 271 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 PPP1R12CQ9BZL4 782 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 RRP15Q9Y3B9 282 aaKnown RBP15.38■□□□□ 0.05
PHF3-209ENST00000509330 H3BRJ5 948 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 M0QZQ0 153 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
PHF3-209ENST00000509330 RAB41Q5JT25 222 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 FAM26DQ5JW98 314 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 FAM171BQ6P995 826 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 ARCQ7LC44 396 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 PRPF39Q86UA1 669 aaKnown RBP15.38■□□□□ 0.05
PHF3-209ENST00000509330 NPWQ8N729 165 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 P2RY11Q96G91 374 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 SUSD3Q96L08 255 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 DEFB118Q96PH6 123 aa15.38■□□□□ 0.05
PHF3-209ENST00000509330 ARVCFO00192 962 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 TRIM66O15016 1216 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 FBXO21O94952 628 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 UPP2O95045 317 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 IFT88Q13099 833 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 TCTN1Q2MV58 587 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 KBTBD12Q3ZCT8 623 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 ATAD1Q8NBU5 361 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 THOC1Q96FV9 657 aaKnown RBP15.37■□□□□ 0.05
PHF3-209ENST00000509330 CHMP6Q96FZ7 201 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 TTLL3Q9Y4R7 772 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 CASP8AP2Q9UKL3 1982 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 A6NNZ2 444 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 RNF103O00237 685 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 ABHD2P08910 425 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 EPHB2P29323 1055 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 ATP5DP30049 168 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 TUBB8Q3ZCM7 444 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 RNF187Q5TA31 235 aaPredicted RBP15.37■□□□□ 0.05
PHF3-209ENST00000509330 CASC4Q6P4E1 433 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 DEFB128Q7Z7B8 93 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 CAND1Q86VP6 1230 aaKnown RBP15.37■□□□□ 0.05
PHF3-209ENST00000509330 PDCD7Q8N8D1 485 aaKnown RBP15.37■□□□□ 0.05
PHF3-209ENST00000509330 URGCPQ8TCY9 931 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 DQX1Q8TE96 717 aaKnown RBP15.37■□□□□ 0.05
PHF3-209ENST00000509330 MAML1Q92585 1016 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 QKIQ96PU8 341 aaKnown RBP eCLIP15.37■□□□□ 0.058e-9■■■■□ 20.6
PHF3-209ENST00000509330 NCAPGQ9BPX3 1015 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 TRABDQ9H4I3 376 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 IL1RAPL1Q9NZN1 696 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 FAM169AQ9Y6X4 670 aa15.37■□□□□ 0.05
PHF3-209ENST00000509330 TCRBV9S1A1TA0A576 114 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 TCP11X1B4DZS4 312 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 USP12O75317 370 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 RPLP2P05387 115 aaKnown RBP15.36■□□□□ 0.05
PHF3-209ENST00000509330 ZFXP17010 805 aaPredicted RBP15.36■□□□□ 0.05
PHF3-209ENST00000509330 SESN2P58004 480 aaPredicted RBP15.36■□□□□ 0.05
PHF3-209ENST00000509330 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 FAM171A1Q5VUB5 890 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 CEP128Q6ZU80 1094 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 PXYLP1Q8TE99 480 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 GGT7Q9UJ14 662 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 SLC27A5Q9Y2P5 690 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 PSMB4P28070 264 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 STX2P32856 288 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 PHBP35232 272 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 APLP1P51693 650 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 GEMIN4P57678 1058 aaKnown RBP15.36■□□□□ 0.05
PHF3-209ENST00000509330 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 UNC5BQ8IZJ1 945 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 COLGALT1Q8NBJ5 622 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
PHF3-209ENST00000509330 EURLQ9NYK6 297 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 SLC17A6Q9P2U8 582 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 OR12D3Q9UGF7 316 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 CHADO15335 359 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 FKTNO75072 461 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 CYP11A1P05108 521 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 F7P08709 466 aaPredicted RBP15.36■□□□□ 0.05
PHF3-209ENST00000509330 SKIP12755 728 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 GPNMBQ14956 572 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 SRLQ86TD4 932 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 TADA2BQ86TJ2 420 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 TRABD2AQ86V40 505 aa15.36■□□□□ 0.05
PHF3-209ENST00000509330 TMEM173Q86WV6 379 aaPredicted RBP15.36■□□□□ 0.05
PHF3-209ENST00000509330 PPM1NQ8N819 430 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms