RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 M0QYV0 167 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 RNF225M0QZC1 329 aaPredicted RBP13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 NPC1O15118 1278 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 ZBTB24O43167 697 aaPredicted RBP13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 GADD45BO75293 160 aaPredicted RBP13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 CALCAP01258 141 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 CYBBP04839 570 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 LCP1P13796 627 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 BRD2P25440 801 aaKnown RBP13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 MAPK8P45983 427 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 HARS2P49590 506 aaKnown RBP13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 RGS7P49802 495 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 ZNF33AQ06730 810 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 STARD3Q14849 445 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 SH3PXD2AQ5TCZ1 1133 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 TMEM215Q68D42 235 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 PMF1Q6P1K2 205 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 MSANTD2Q6P1R3 559 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 ARHGEF19Q8IW93 802 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 DDI1Q8WTU0 396 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 RNF139Q8WU17 664 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 HSPA12BQ96MM6 686 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 SLC2A11Q9BYW1 496 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 ABCC13Q9NSE7 274 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 AKAP13Q12802 2813 aa13.58□□□□□ -0.24
HMGCS1-205ENST00000508319 PCNX2A6NKB5 2137 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 SPEGQ15772 3267 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 CFAP47Q6ZTR5 3102 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 BICDL2A1A5D9 508 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 PIK3R2O00459 728 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 BIN1O00499 593 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 LATS1O95835 1130 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 IGLV3-27P01718 113 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 CFIP05156 583 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 CSRP1P21291 193 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 HLA-FP30511 346 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 MARSP56192 900 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 GCNT1Q02742 428 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 ZNF234Q14588 700 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 STILQ15468 1287 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 CNGA2Q16280 664 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 UAP1L1Q3KQV9 507 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 ADGRF1Q5T601 910 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 KIAA1324Q6UXG2 1013 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 RRAGAQ7L523 313 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 METTL3Q86U44 580 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 TRIML1Q8N9V2 468 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 UCMAQ8WVF2 138 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 KREMEN1Q96MU8 473 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 FSCN3Q9NQT6 498 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 ELOVL2Q9NXB9 296 aa13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 USP36Q9P275 1121 aaKnown RBP13.57□□□□□ -0.24
HMGCS1-205ENST00000508319 CHD6Q8TD26 2715 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 KCNJ18B7U540 433 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 LTFP02788 710 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 SERPINF2P08697 491 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 CEACAM1P13688 526 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 PRKCHP24723 683 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 SGSHP51688 502 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 COPAP53621 1224 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 STX17P56962 302 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 ZNF445P59923 1031 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 ZNF252P-AS1Q0IIN9 211 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 CETN1Q12798 172 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 KCNH2Q12809 1159 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 PAK1Q13153 545 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 NUMA1Q14980 2115 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 DUOXA1Q1HG43 343 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 MPPE1Q53F39 396 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 RABEPKQ7Z6M1 372 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 CEP76Q8TAP6 659 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 ZNF419Q96HQ0 510 aaPredicted RBP13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 CIPCQ9C0C6 399 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 PRDM16Q9HAZ2 1276 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 SLC6A14Q9UN76 642 aa13.56□□□□□ -0.24
HMGCS1-205ENST00000508319 TSPAN3O60637 253 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 GNA14O95837 355 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 NCAM1P13591 858 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 CD6P30203 668 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 CACUL1Q86Y37 369 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 EHBP1Q8NDI1 1231 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 DEFB124Q8NES8 71 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 TOE1Q96GM8 510 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 HSFY1Q96LI6 401 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 INTS2Q9H0H0 1204 aaKnown RBP13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 WASF3Q9UPY6 502 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 CNTN6Q9UQ52 1028 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 ZZEF1O43149 2961 aa13.55□□□□□ -0.24
HMGCS1-205ENST00000508319 SYNCRIPO60506 623 aaKnown RBP13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 NDUFS2O75306 463 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 FBXO21O94952 628 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 IGLV3-19P01714 112 aa13.54□□□□□ -0.24
HMGCS1-205ENST00000508319 AFPP02771 609 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms