RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 TCEANC2Q96MN5 208 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 CDC6Q99741 560 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 DHRS4Q9BTZ2 278 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 SLITRK6Q9H5Y7 841 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 CYP4F11Q9HBI6 524 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 GCM1Q9NP62 436 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 XPNPEP1Q9NQW7 623 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 THG1LQ9NWX6 298 aaKnown RBP7.32□□□□□ -1.24
NR1I3-224ENST00000507215 AFF4Q9UHB7 1163 aaKnown RBP7.32□□□□□ -1.24
NR1I3-224ENST00000507215 TRAF6Q9Y4K3 522 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 ASB3Q9Y575 518 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 TICRRQ7Z2Z1 1910 aa7.32□□□□□ -1.24
NR1I3-224ENST00000507215 LRRIQ4A6NIV6 560 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 C22orf46C9J442 243 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 SPECC1L-ADORA2AF8WAN1 911 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 B4GALT5O43286 388 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 SLC37A4O43826 429 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 SLITRK3O94933 977 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 NTRK1P04629 796 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PAX3P23760 479 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 RARRES1P49788 294 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 NOVA1P51513 510 aaKnown RBP7.31□□□□□ -1.24
NR1I3-224ENST00000507215 RPL11P62913 178 aaKnown RBP7.31□□□□□ -1.24
NR1I3-224ENST00000507215 LONRF2Q1L5Z9 754 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 FBXO43Q4G163 708 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 C2orf27AQ580R0 203 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 BMP2KLQ5H9B9 411 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 NCAPH2Q6IBW4 605 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 ZNF280DQ6N043 979 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PAQR3Q6TCH7 311 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 TPH2Q8IWU9 490 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 FBXO15Q8NCQ5 510 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-224ENST00000507215 THAP3Q8WTV1 239 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-224ENST00000507215 GJA10Q969M2 543 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PPP1R10Q96QC0 940 aaKnown RBP7.31□□□□□ -1.24
NR1I3-224ENST00000507215 HSD17B14Q9BPX1 270 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PAAF1Q9BRP4 392 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 POLR3FQ9H1D9 316 aaPredicted RBP7.31□□□□□ -1.24
NR1I3-224ENST00000507215 ARRDC1-AS1Q9H2J1 176 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PDZD7Q9H5P4 517 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 GPR27Q9NS67 375 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 HSFX1Q9UBD0 423 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PCDHA12Q9UN75 941 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 SLC8A2Q9UPR5 921 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 SPEGQ15772 3267 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 SDK1Q7Z5N4 2213 aa7.31□□□□□ -1.24
NR1I3-224ENST00000507215 PDCD11Q14690 1871 aaKnown RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 A0A1W2PQJ5 194 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 H0Y626 953 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 ADAMTS3O15072 1205 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 CCNT1O60563 726 aaKnown RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 TRIM16O95361 564 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 CYBBP04839 570 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 TKTP29401 623 aaKnown RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 NAMPTP43490 491 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 CLCNKBP51801 687 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 EPHB3P54753 998 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 GRSF1Q12849 480 aaKnown RBP eCLIP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 LSAMPQ13449 338 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 ADCK5Q3MIX3 580 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 PLEKHN1Q494U1 663 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 CTXN3Q4LDR2 81 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 ARHGAP15Q53QZ3 475 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 LRSAM1Q6UWE0 723 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 SYDE1Q6ZW31 735 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 ITIH5Q86UX2 942 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 DEPTORQ8TB45 409 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 WASF1Q92558 559 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 HAS1Q92839 578 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 DYDC2Q96IM9 177 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 IFT74Q96LB3 600 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 EIF2AK1Q9BQI3 630 aaKnown RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 EDEM2Q9BV94 578 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 CCDC94Q9BW85 323 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 CNTD2Q9H8S5 307 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 RGL1Q9NZL6 768 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 MBD1Q9UIS9 605 aaPredicted RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 KCNG1Q9UIX4 513 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 NEUROG3Q9Y4Z2 214 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 NUB1Q9Y5A7 615 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 X6R8D5 127 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 COL4A3Q01955 1670 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 LAMA1P25391 3075 aa7.3□□□□□ -1.24
NR1I3-224ENST00000507215 DSPP15924 2871 aaKnown RBP7.3□□□□□ -1.24
NR1I3-224ENST00000507215 SLC38A8A6NNN8 435 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 PODXLO00592 558 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 EPB41L2O43491 1005 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 PRKCBP05771 671 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 DRD1P21728 446 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 MUTP22033 750 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 RPS6KB1P23443 525 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 MARCKSP29966 332 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 PDIA3P30101 505 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 ALDH1A3P47895 512 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 SRSF3P84103 164 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 PRR5P85299 388 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 CYP4A11Q02928 519 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 TWF1Q12792 350 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms