RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CNTN6Q9UQ52 1028 aa15.05■□□□□ -0
HMGCS1-203ENST00000507004 CTNND2Q9UQB3 1225 aa15.05■□□□□ -0
HMGCS1-203ENST00000507004 TULP2O00295 520 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 LTFP02788 710 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 SYPP08247 313 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 SERPINF2P08697 491 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 CEACAM1P13688 526 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 LCP1P13796 627 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 GNSP15586 552 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 KCNA4P22459 653 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 PTGER3P43115 390 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 IRX4P78413 519 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 SHC2P98077 582 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 GFPT1Q06210 699 aaPredicted RBP15.04■□□□□ -0
HMGCS1-203ENST00000507004 GEN1Q17RS7 908 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 CCDC117Q8IWD4 279 aaPredicted RBP15.04■□□□□ -0
HMGCS1-203ENST00000507004 AHI1Q8N157 1196 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 TFAP2BQ92481 460 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 ZNF419Q96HQ0 510 aaPredicted RBP15.04■□□□□ -0
HMGCS1-203ENST00000507004 SERPINB11Q96P15 392 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 SRRTQ9BXP5 876 aaKnown RBP15.04■□□□□ -0
HMGCS1-203ENST00000507004 PCED1AQ9H1Q7 454 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 SLC32A1Q9H598 525 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 PRDM16Q9HAZ2 1276 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 RWDD2AQ9UIY3 292 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 PLA2G4CQ9UP65 541 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 FRYLO94915 3013 aa15.04■□□□□ -0
HMGCS1-203ENST00000507004 DNAH14Q0VDD8 3507 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 GON4LQ3T8J9 2241 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 UPK3BL1B0FP48 263 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 UPK3BL2E5RIL1 263 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 ATP5BP06576 529 aaKnown RBP15.03■□□□□ -0
HMGCS1-203ENST00000507004 BMP6P22004 513 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 PMLP29590 882 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 CD6P30203 668 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 RPL34P49207 117 aaKnown RBP15.03■□□□□ -0
HMGCS1-203ENST00000507004 NOVA1P51513 510 aaKnown RBP15.03■□□□□ -0
HMGCS1-203ENST00000507004 MTA1Q13330 715 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 HNRNPDQ14103 355 aaKnown RBP15.03■□□□□ -0
HMGCS1-203ENST00000507004 KIAA1211LQ6NV74 962 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 PMF1Q6P1K2 205 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 KIAA1324Q6UXG2 1013 aaKnown RBP15.03■□□□□ -0
HMGCS1-203ENST00000507004 SERPINA13PQ6UXR4 307 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 HDDC3Q8N4P3 179 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.03■□□□□ -0
HMGCS1-203ENST00000507004 CADM4Q8NFZ8 388 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 EDEM1Q92611 657 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 PRCCQ92733 491 aaPredicted RBP15.03■□□□□ -0
HMGCS1-203ENST00000507004 CIPCQ9C0C6 399 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 ITM2CQ9NQX7 267 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 KIAA1468Q9P260 1216 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 SFMBT1Q9UHJ3 866 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 CYP8B1Q9UNU6 501 aa15.03■□□□□ -0
HMGCS1-203ENST00000507004 PI4KAP42356 2102 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 GTPBP10A4D1E9 387 aaKnown RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 BIN1O00499 593 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 CDX4O14627 284 aaPredicted RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 IGLV3-27P01718 113 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 CFIP05156 583 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 ACADMP11310 421 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 NCAM1P13591 858 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 ITPKAP23677 461 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 BRD2P25440 801 aaKnown RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 HOXD9P28356 352 aaPredicted RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 IL12RB1P42701 662 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 RGS7P49802 495 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 TBX4P57082 545 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 SNX16P57768 344 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 ZBTB16Q05516 673 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 SFSWAPQ12872 951 aaKnown RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 ZNF234Q14588 700 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 FUT11Q495W5 492 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 N4BP2L1Q5TBK1 243 aaPredicted RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 ARMCX6Q7L4S7 300 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 RRAGAQ7L523 313 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 TMPRSS6Q8IU80 811 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 MLKLQ8NB16 471 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 SIPA1Q96FS4 1042 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 MED15Q96RN5 788 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 ZDHHC5Q9C0B5 715 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 INTS2Q9H0H0 1204 aaKnown RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 USP36Q9P275 1121 aaKnown RBP15.02■□□□□ -0
HMGCS1-203ENST00000507004 RAD54BQ9Y620 910 aa15.02■□□□□ -0
HMGCS1-203ENST00000507004 PATE3B3GLJ2 98 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 RNF225M0QZC1 329 aaPredicted RBP15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 ACSL4O60488 711 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 IGLV3-19P01714 112 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 C7P10643 843 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 KRT5P13647 590 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 ENGP17813 658 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 RDXP35241 583 aaKnown RBP15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 GPD2P43304 727 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 STX17P56962 302 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 PSAPL1Q6NUJ1 521 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 GBP6Q6ZN66 633 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 RGL4Q8IZJ4 473 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 FRMD1Q8N878 549 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 HJURPQ8NCD3 748 aaPredicted RBP15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 OR2T3Q8NH03 318 aa15.01□□□□□ -0.01
HMGCS1-203ENST00000507004 NDRG1Q92597 394 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms