RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC12A8A0AV02 714 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 TMEM191CA6NGB0 347 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 MYO1FO00160 1098 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 GFRA2O00451 464 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 TRDMT1O14717 391 aaKnown RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 AP5Z1O43299 807 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 CACNG3O60359 315 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 GREM1O60565 184 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 NDUFA10O95299 355 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 PRAMEF12O95522 483 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 PENKP01210 267 aaPredicted RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 CFHP08603 1231 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 FAM228BP0C875 321 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 GPD1P21695 349 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 GDI1P31150 447 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 RPS9P46781 194 aaKnown RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 EFEMP1Q12805 493 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 LRRC32Q14392 662 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 EIF4HQ15056 248 aaKnown RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 MLF2Q15773 248 aaPredicted RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 BOLA3Q53S33 107 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 RABGAP1LQ5R372 815 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 LRRC38Q5VT99 294 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 ZNF852Q6ZMS4 543 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 CHST9Q7L1S5 443 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 POLNQ7Z5Q5 900 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 METTL3Q86U44 580 aaKnown RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 DEFB106AQ8N104 65 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 KDM1BQ8NB78 822 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 WFIKKN2Q8TEU8 576 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 TEKT4Q8WW24 435 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 ZNF653Q96CK0 615 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 PDLIM2Q96JY6 352 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 WDCPQ9H6R7 721 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 ECT2Q9H8V3 914 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 FAM204AQ9H8W3 233 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 SPHK2Q9NRA0 654 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 GKN1Q9NS71 199 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 DDIT4Q9NX09 232 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 CFAP97Q9P2B7 532 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 RCOR3Q9P2K3 495 aaPredicted RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 CNOT8Q9UFF9 292 aaKnown RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 RASAL2Q9UJF2 1139 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 FBXO10Q9UK96 956 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 EPN1Q9Y6I3 576 aaPredicted RBP8.79□□□□□ -1
PDGFC-205ENST00000506880 MUC3AQ02505 3323 aa8.79□□□□□ -1
PDGFC-205ENST00000506880 TRIOO75962 3097 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 IGLV3-10A0A075B6K4 115 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 M0QYT0 321 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 MDM4O15151 490 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 PJA2O43164 708 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 ACSL4O60488 711 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 GPR37L1O60883 481 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 GJA1P17302 382 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 RRM1P23921 792 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 CORO1AP31146 461 aaKnown RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 TNFRSF4P43489 277 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 HCAR3P49019 387 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 GALCP54803 685 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 ADKP55263 362 aaKnown RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 DEUP1Q05D60 604 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 HADHQ16836 314 aaKnown RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 SLC44A4Q53GD3 710 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 STXBP5Q5T5C0 1151 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 TMCO4Q5TGY1 634 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 LRRC31Q6UY01 552 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 TRIM67Q6ZTA4 783 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 TRMT11Q7Z4G4 463 aaKnown RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 TAC4Q86UU9 113 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 LRRC49Q8IUZ0 686 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 RNF10Q8N5U6 811 aaKnown RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 HJURPQ8NCD3 748 aaPredicted RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 FCRL2Q96LA5 508 aaPredicted RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 SLC22A12Q96S37 553 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 CYP2S1Q96SQ9 504 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 KXD1Q9BQD3 176 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 IRF2BPLQ9H1B7 796 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 FBRSQ9HAH7 460 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 ARHGEF3Q9NR81 526 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 METTL5Q9NRN9 209 aaKnown RBP8.78□□□□□ -1
PDGFC-205ENST00000506880 TJP2Q9UDY2 1190 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 NAALADL1Q9UQQ1 740 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 VCANP13611 3396 aa8.78□□□□□ -1
PDGFC-205ENST00000506880 A0A1B0GVM2 712 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 KANSL1LA0AUZ9 987 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 TCAF2A6NFQ2 919 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 F5H5T6 163 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 FGF10O15520 208 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 CCP110O43303 1012 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 ATG13O75143 517 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 CLDN11O75508 207 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 LUC7L3O95232 432 aaKnown RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 PAPSS2O95340 614 aaPredicted RBP8.77□□□□□ -1.01
PDGFC-205ENST00000506880 KRT7P08729 469 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 C7P10643 843 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 ADH5P11766 374 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 SKILP12757 684 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 L1CAMP32004 1257 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 CTHP32929 405 aa8.77□□□□□ -1.01
PDGFC-205ENST00000506880 RFC1P35251 1148 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms