RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CEP78Q5JTW2 689 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 TTC22Q5TAA0 569 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 KIAA1614Q5VZ46 1190 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 RINT1Q6NUQ1 792 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 DPY19L2P1Q6NXN4 242 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 GGT6Q6P531 493 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 RANBP10Q6VN20 620 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 TTC30AQ86WT1 665 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 GALNT16Q8N428 558 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 NKAPQ8N5F7 415 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 OTUD7AQ8TE49 926 aaPredicted RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 ASB12Q8WXK4 309 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 AKAP1Q92667 903 aaKnown RBP eCLIP3.33□□□□□ -1.88
GYPB-207ENST00000506679 TRMT61AQ96FX7 289 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 C5orf34Q96MH7 638 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 HS6ST2Q96MM7 605 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 RTKNQ9BST9 563 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 EFHD1Q9BUP0 239 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 DDX23Q9BUQ8 820 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 ADGRE3Q9BY15 652 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 PABPC3Q9H361 631 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 AGO4Q9HCK5 861 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 FBXO28Q9NVF7 368 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 HERC5Q9UII4 1024 aaKnown RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 CNTN6Q9UQ52 1028 aa3.33□□□□□ -1.88
GYPB-207ENST00000506679 SIRT4Q9Y6E7 314 aaPredicted RBP3.33□□□□□ -1.88
GYPB-207ENST00000506679 SLC38A8A6NNN8 435 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 M0QYT0 321 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 OVOL3O00110 214 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 FCHO1O14526 889 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 RRHO14718 337 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 TCEA3O75764 348 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 ACTL6BO94805 426 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 GYS1P13807 737 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 IGFBP2P18065 325 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 IDUAP35475 653 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 POLE2P56282 527 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 FOXL2P58012 376 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 FAM3BP58499 235 aaPredicted RBP3.32□□□□□ -1.88
GYPB-207ENST00000506679 DMWDQ09019 674 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 TRIM14Q14142 442 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 ELF2Q15723 593 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 CNGA3Q16281 694 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 NFRKBQ6P4R8 1299 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 KRT27Q7Z3Y8 459 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 TFAP2DQ7Z6R9 452 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 NEK8Q86SG6 692 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 RFX6Q8HWS3 928 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 SLC44A2Q8IWA5 706 aaPredicted RBP3.32□□□□□ -1.88
GYPB-207ENST00000506679 MAP4K1Q92918 833 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 ZNF845Q96IR2 970 aaPredicted RBP3.32□□□□□ -1.88
GYPB-207ENST00000506679 FAR2Q96K12 515 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 EIF3CQ99613 913 aaKnown RBP3.32□□□□□ -1.88
GYPB-207ENST00000506679 ELOVL1Q9BW60 279 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 TMEM120AQ9BXJ8 343 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 NUAK2Q9H093 628 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 MLXIPLQ9NP71 852 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 LRFN1Q9P244 771 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 GRHPRQ9UBQ7 328 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 MAFFQ9ULX9 164 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 DAPP1Q9UN19 280 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 PCDHB7Q9Y5E2 793 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 SPATA31A5Q5VU36 1347 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 SPATA31A7Q8IWB4 1347 aa3.32□□□□□ -1.88
GYPB-207ENST00000506679 COL3A1P02461 1466 aaPredicted RBP3.31□□□□□ -1.88
GYPB-207ENST00000506679 WDR17Q8IZU2 1322 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 CYP2D7A0A087X1C5 515 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.31□□□□□ -1.88
GYPB-207ENST00000506679 KIF28PB7ZC32 967 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 PPP6CO00743 305 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 BCAR3O75815 825 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 LARGE1O95461 756 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 CYP3A4P08684 503 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 EPHB2P29323 1055 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 AKT1P31749 480 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 CHKAP35790 457 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 STAT6P42226 847 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 GRK6P43250 576 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 AGTR2P50052 363 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 RPL15P61313 204 aaKnown RBP3.31□□□□□ -1.88
GYPB-207ENST00000506679 AP2B1P63010 937 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 CFHR1Q03591 330 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 TLE3Q04726 772 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 KRTAP1-1Q07627 177 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 SF3A3Q12874 501 aaKnown RBP eCLIP3.31□□□□□ -1.88
GYPB-207ENST00000506679 CBFBQ13951 182 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 DAZAP2Q15038 168 aaPredicted RBP3.31□□□□□ -1.88
GYPB-207ENST00000506679 BTBD16Q32M84 506 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 P3H1Q32P28 736 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 GRAMD1BQ3KR37 738 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 SULT6B1Q6IMI4 303 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 CCDC174Q6PII3 467 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 EXD3Q8N9H8 876 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 SCAMP5Q8TAC9 235 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 DDB2Q92466 427 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 SENP7Q9BQF6 1050 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 MECRQ9BV79 373 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 VPS16Q9H269 839 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 MLXIPQ9HAP2 919 aa3.31□□□□□ -1.88
GYPB-207ENST00000506679 PDGFCQ9NRA1 345 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms