RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 SEMA6DQ8NFY4 1073 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 OR52L2PQ8NGH6 319 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TRAPPC12Q8WVT3 735 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 HMGB4Q8WW32 186 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 NELL1Q92832 810 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TBC1D20Q96BZ9 403 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 REXO5Q96IC2 774 aaKnown RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 ASB2Q96Q27 587 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 ELOVL1Q9BW60 279 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 TMEM120AQ9BXJ8 343 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 RAB21Q9UL25 225 aa4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 UBE2J1Q9Y385 318 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 HEMK1Q9Y5R4 338 aaPredicted RBP4.62□□□□□ -1.67
TOPBP1-204ENST00000505804 HMX3A6NHT5 357 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 C16orf96A6NNT2 1141 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 CYP2A6P11509 494 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 AGTR2P50052 363 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 SF3A3Q12874 501 aaKnown RBP eCLIP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 CBFBQ13951 182 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 PRKG1Q13976 671 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 AAK1Q2M2I8 961 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 INO80DQ53TQ3 878 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 NFRKBQ6P4R8 1299 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 VSTM1Q6UX27 236 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 ZNF782Q6ZMW2 699 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 PRIMA1Q86XR5 153 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 DNAJC10Q8IXB1 793 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 GALNT15Q8N3T1 639 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 HASPINQ8TF76 798 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 GLMPQ8WWB7 406 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 RUBCNQ92622 972 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 AKAP1Q92667 903 aaKnown RBP eCLIP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 TRAPPC9Q96Q05 1148 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM167BQ9BTA0 163 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 TAF1DQ9H5J8 278 aaPredicted RBP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 CDCP1Q9H5V8 836 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 ELAC1Q9H777 363 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 KCNK9Q9NPC2 374 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 SRP68Q9UHB9 627 aaKnown RBP4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 NFU1Q9UMS0 254 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 SLC12A4Q9UP95 1085 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 ZBTB1Q9Y2K1 713 aa4.61□□□□□ -1.67
TOPBP1-204ENST00000505804 EFCAB8A8MWE9 144 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 TTC34A8MYJ7 566 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 CHRM5P08912 532 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 MATN1P21941 496 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 VPS41P49754 854 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 FAM3BP58499 235 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 RPL15P61313 204 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 NHLH1Q02575 133 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 RPS6KA2Q15349 733 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 TAF5Q15542 800 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 CNGA3Q16281 694 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 CERKLQ49MI3 558 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 CC2D1BQ5T0F9 858 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 GORABQ5T7V8 394 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 LDHAL6AQ6ZMR3 332 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 RAB11FIP2Q7L804 512 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 SUGP1Q8IWZ8 645 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 C16orf71Q8IYS4 520 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 DPF1Q92782 380 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 C3orf49Q96BT1 292 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 HIC2Q96JB3 615 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 FAR2Q96K12 515 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 CRAMP1Q96RY5 1269 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 DDX23Q9BUQ8 820 aaKnown RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 MYH16Q9H6N6 1097 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 ITM2CQ9NQX7 267 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 TRPC5Q9UL62 973 aaPredicted RBP4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 SPATA31A1Q5TZJ5 1347 aa4.6□□□□□ -1.67
TOPBP1-204ENST00000505804 LINC01548A6NM66 108 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 SLC38A8A6NNN8 435 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 TMEM232C9JQI7 657 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PRYO14603 147 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 NKX2-8O15522 239 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 KAT7O95251 611 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 LARGE1O95461 756 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PRKCGP05129 697 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 SLC3A2P08195 630 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 DHRS4L1P0CG22 281 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 SFPQP23246 707 aaKnown RBP eCLIP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 CST5P28325 142 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 HOXD12P35452 270 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 STAT6P42226 847 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PRKAA2P54646 552 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 NANOS3P60323 173 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 RBM6P78332 1123 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 RNASELQ05823 741 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 KPNB1Q14974 876 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 ZRSR2Q15696 482 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PFKFB3Q16875 520 aaPredicted RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 GALNTL6Q49A17 601 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 TTC22Q5TAA0 569 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 C8orf58Q8NAV2 365 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 CSGALNACT1Q8TDX6 532 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 PNISRQ8TF01 805 aaKnown RBP4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 C5orf34Q96MH7 638 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 EFHD1Q9BUP0 239 aa4.59□□□□□ -1.67
TOPBP1-204ENST00000505804 NUAK2Q9H093 628 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms