RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 SLC44A1Q8WWI5 657 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
NFKB1-205ENST00000505458 OSBPL2Q9H1P3 480 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 MIOSQ9NXC5 875 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 GOLGA8MH3BSY2 632 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 CLDN5O00501 218 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 ELK3P41970 407 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 CXCR3P49682 368 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 FAM189BP81408 668 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 OTUD1Q5VV17 481 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-205ENST00000505458 SLC26A11Q86WA9 606 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 ANKMY2Q8IV38 441 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 LZTR1Q8N653 840 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 LPIN3Q9BQK8 851 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 ABCC13Q9NSE7 274 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 ZC3H7BQ9UGR2 993 aaKnown RBP11.7□□□□□ -0.54
NFKB1-205ENST00000505458 MYBPHLA2RUH7 354 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 HHLA1C9JL84 531 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 GOT1P17174 413 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 PRKCHP24723 683 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 GCAP28676 217 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 GBE1Q04446 702 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 SEMA3BQ13214 749 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 BFSP2Q13515 415 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 SPATA2LQ8IUW3 424 aaPredicted RBP11.7□□□□□ -0.54
NFKB1-205ENST00000505458 LRRC49Q8IUZ0 686 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 TRIM42Q8IWZ5 723 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 GSDMBQ8TAX9 411 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 PKMYT1Q99640 499 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 ETNK1Q9HBU6 452 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 COMMD8Q9NX08 183 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 CTNNAL1Q9UBT7 734 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 TBK1Q9UHD2 729 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 CHMP2BQ9UQN3 213 aa11.7□□□□□ -0.54
NFKB1-205ENST00000505458 DCLK1O15075 740 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 FGF10O15520 208 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 KRT38O76015 456 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 APRTP07741 180 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 NCAM1P13591 858 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 AMPD1P23109 780 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 TTC39BQ5VTQ0 682 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 HHATQ5VTY9 493 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 CDKL2Q92772 493 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 MKS1Q9NXB0 559 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ALADP13716 330 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 YWHAHQ04917 246 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 FRG1Q14331 258 aaKnown RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 DBN1Q16643 649 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 LACTB2Q53H82 288 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 NOMO2Q5JPE7 1267 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ANKRD20A2Q5SQ80 823 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ANKRD20A1Q5TYW2 823 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ANKRD20A3Q5VUR7 823 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 KIAA0319Q5VV43 1072 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 NUGGCQ68CJ6 796 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 LRRC6Q86X45 466 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 LRRC34Q8IZ02 419 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ANKRD42Q8N9B4 389 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 RNF169Q8NCN4 708 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ZMIZ2Q8NF64 920 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 EBNA1BP2Q99848 306 aaKnown RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 DDIT4Q9NX09 232 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 KBTBD13C9JR72 458 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 TRIM66O15016 1216 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 MGEA5O60502 916 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 FSBPO95073 299 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 PARNO95453 639 aaKnown RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 APOEP02649 317 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 MT-ND3P03897 115 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 TFE3P19532 575 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 DSC1Q08554 894 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 ELAVL2Q12926 359 aaKnown RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 NME3Q13232 169 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 RAB6CQ53S08 254 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 LRRC8BQ6P9F7 803 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 C3orf58Q8NDZ4 430 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 FAM193BQ96PV7 902 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 TGS1Q96RS0 853 aaKnown RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 COLEC11Q9BWP8 271 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 RAB6CQ9H0N0 254 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 RASSF4Q9H2L5 321 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 WDR6Q9NNW5 1121 aaKnown RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 TMEM161AQ9NX61 479 aa11.69□□□□□ -0.54
NFKB1-205ENST00000505458 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 USP15Q9Y4E8 981 aaPredicted RBP11.69□□□□□ -0.54
NFKB1-205ENST00000505458 TCRBV9S1A1TA0A576 114 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 BEST1O76090 585 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 SLC2A3P11169 496 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 CKBP12277 381 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 CA4P22748 312 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 SSTR1P30872 391 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 MAGEA11P43364 429 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 NRG1Q02297 640 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-205ENST00000505458 IFRD2Q12894 506 aaPredicted RBP11.68□□□□□ -0.54
NFKB1-205ENST00000505458 PDK4Q16654 411 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 DEFB115Q30KQ5 88 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 DCAKDQ8WVC6 231 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 HDAC11Q96DB2 347 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 CAPNS2Q96L46 248 aa11.68□□□□□ -0.54
NFKB1-205ENST00000505458 HAPLN3Q96S86 360 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms