RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 TTC31Q49AM3 519 aaPredicted RBP4.48□□□□□ -1.69
CPNE4-204ENST00000505331 C14orf28Q4W4Y0 310 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 CCDC183Q5T5S1 534 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 SDHAF4Q5VUM1 108 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 RALYLQ86SE5 291 aaKnown RBP4.48□□□□□ -1.69
CPNE4-204ENST00000505331 METTL23Q86XA0 190 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PRIMA1Q86XR5 153 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 TMTC2Q8N394 836 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 KCTD17Q8N5Z5 321 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 CEP120Q8N960 986 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 UCMAQ8WVF2 138 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 TMEM159Q96B96 161 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 CENPTQ96BT3 561 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 SERAC1Q96JX3 654 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 SENP8Q96LD8 212 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 B3GNT4Q9C0J1 378 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 CCDC113Q9H0I3 377 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 FBRSQ9HAH7 460 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 EBF2Q9HAK2 575 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 EPB41L5Q9HCM4 733 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PREBQ9HCU5 417 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 ABCB6Q9NP58 842 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 UCKL1Q9NWZ5 548 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 WDR35Q9P2L0 1181 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 LRWD1Q9UFC0 647 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 PISDQ9UG56 409 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 TUBGCP4Q9UGJ1 667 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 NCKAP1Q9Y2A7 1128 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 USP20Q9Y2K6 914 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 SH3BP1Q9Y3L3 701 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 LRRK1Q38SD2 2015 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 NBEAL1Q6ZS30 2694 aa4.48□□□□□ -1.69
CPNE4-204ENST00000505331 HIVEP3Q5T1R4 2406 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ARID2Q68CP9 1835 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CPED1A4D0V7 1026 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 EME2A4GXA9 379 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ZNF840PA6NDX5 716 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CCDC69A6NI79 296 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LRRC72A6NJI9 287 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 STMND1H3BQB6 276 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 K7EM74 188 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ZBTB39O15060 712 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SCAMP1O15126 338 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SORBS2O94875 1100 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CD2BP2O95400 341 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 TUBB4AP04350 444 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 EDN1P05305 212 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CISD3P0C7P0 127 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 MBL2P11226 248 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LIFP15018 202 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GSPT1P15170 499 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 FOSL1P15407 271 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 BPIP17213 487 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LIG1P18858 919 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 RXRAP19793 462 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CYP3A5P20815 502 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 FECHP22830 423 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 PRKCHP24723 683 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ITGB7P26010 798 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GNA11P29992 359 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SSTR2P30874 369 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CSTF2P33240 577 aaKnown RBP eCLIP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CCR5P51681 352 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 EFNA5P52803 228 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 COPB1P53618 953 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GALCP54803 685 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LILRA4P59901 499 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 UBE2HP62256 183 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GABPB1Q06547 395 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SFSWAPQ12872 951 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CAMK2GQ13555 558 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 SPIDRQ14159 915 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 EPHA7Q15375 998 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 INPP5JQ15735 1006 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CDKN3Q16667 212 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 NT5DC1Q5TFE4 455 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 TMEM164Q5U3C3 297 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CEP135Q66GS9 1140 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 NUGGCQ68CJ6 796 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 NAPEPLDQ6IQ20 393 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ZCCHC8Q6NZY4 707 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GUSBP11Q6P575 273 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 USP30Q70CQ3 517 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 EFL1Q7Z2Z2 1120 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 TMPRSS9Q7Z410 1059 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CCDC83Q8IWF9 413 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 BBS7Q8IWZ6 715 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 FANCBQ8NB91 859 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LRRN4CLQ8ND94 238 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 NCOA7Q8NI08 942 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 DEPTORQ8TB45 409 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 ETNPPLQ8TBG4 499 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GPT2Q8TD30 523 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 LEO1Q8WVC0 666 aaPredicted RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 GOLGA1Q92805 767 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 NKD1Q969G9 470 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CEP295NLQ96MC4 621 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 CCDC43Q96MW1 224 aaKnown RBP4.47□□□□□ -1.69
CPNE4-204ENST00000505331 TCHPQ9BT92 498 aa4.47□□□□□ -1.69
CPNE4-204ENST00000505331 MTA3Q9BTC8 594 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms