RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TNRQ92752 1358 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 TMEM2Q9UHN6 1383 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 FMN2Q9NZ56 1722 aa4.49□□□□□ -1.69
RFC1-208ENST00000504849 NWD1Q149M9 1564 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 MAP3K15Q6ZN16 1313 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CFAP65Q6ZU64 1925 aaKnown RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 A0A0B4J269 797 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 A0A1B0GUL7 405 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 AQP12BA6NM10 295 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CPLX1O14810 134 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 KIF5CO60282 957 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 STX10O60499 249 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 RPS6KA4O75676 772 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 TMEM63AO94886 807 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 IL18BPO95998 194 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ITGA2BP08514 1039 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CCDC175P0C221 793 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ATP1A3P13637 1013 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 IDEP14735 1019 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CMA1P23946 247 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 APEX1P27695 318 aaKnown RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 ECHS1P30084 290 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ACTN2P35609 894 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 USP8P40818 1118 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 SYKP43405 635 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 LMAN1P49257 510 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 NDUFA8P51970 172 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 NR1H2P55055 460 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 GNG11P61952 73 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 RPS16P62249 146 aaKnown RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 TARDBPQ13148 414 aaKnown RBP eCLIP4.48□□□□□ -1.69
RFC1-208ENST00000504849 SNAPC2Q13487 334 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 NFYCQ13952 458 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 TRIM29Q14134 588 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 RRP1BQ14684 758 aaKnown RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 MEA1Q16626 185 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 TIGD6Q17RP2 521 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 SKIDA1Q1XH10 827 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 DPCR1Q3MIW9 517 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 C3orf38Q5JPI3 329 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ARMC3Q5W041 872 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 VASNQ6EMK4 673 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 LIN54Q6MZP7 749 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ZNF530Q6P9A1 599 aaPredicted RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 ZNF783Q6ZMS7 281 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 RNF44Q7L0R7 432 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 DEFB132Q7Z7B7 95 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 GATAD2AQ86YP4 633 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CPOQ8IVL8 374 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 HERC6Q8IVU3 1022 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ELOA2Q8IYF1 753 aaPredicted RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 FBXL16Q8N461 479 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 LINC00301Q8NCQ3 95 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 NEK11Q8NG66 645 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CTCFLQ8NI51 663 aaPredicted RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 PPP1R14CQ8TAE6 165 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ADAMTS15Q8TE58 950 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 SDCCAG3Q96C92 435 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 NELL2Q99435 816 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 BAG1Q99933 345 aaPredicted RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 VRK1Q99986 396 aaPredicted RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 MAGEB5Q9BZ81 275 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 UBXN6Q9BZV1 441 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ZNF518BQ9C0D4 1074 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 YY1AP1Q9H869 796 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 PREBQ9HCU5 417 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 MED4Q9NPJ6 270 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 INCENPQ9NQS7 918 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 AASSQ9UDR5 926 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 SRP68Q9UHB9 627 aaKnown RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 HERC5Q9UII4 1024 aaKnown RBP4.48□□□□□ -1.69
RFC1-208ENST00000504849 PACSIN3Q9UKS6 424 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 PCDHA7Q9UN72 937 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 PCDHA6Q9UN73 950 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 GPR34Q9UPC5 381 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 PPP2R2CQ9Y2T4 447 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 FPGT-TNNI3KV9GXZ4 949 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 CARMIL3Q8ND23 1372 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 PALLDQ8WX93 1383 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 ROBO1Q9Y6N7 1651 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 STRCP1A6NGW2 1772 aa4.48□□□□□ -1.69
RFC1-208ENST00000504849 WDR19Q8NEZ3 1342 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 SALL1Q9NSC2 1324 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 A0A1B0GVL5 298 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 FAM234BA2RU67 622 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 PGPEP1LA6NFU8 196 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 NT5C1B-RDH14C9J2C7 533 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 AKR1B10O60218 316 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 TBC1D4O60343 1298 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 PPP6R2O75170 966 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 RPS6KA5O75582 802 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 CYP21A2P08686 494 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 PFKFB1P16118 471 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 CTSSP25774 331 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 PRDX5P30044 214 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 MC4RP32245 332 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 GALNSP34059 522 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 GLRBP48167 497 aa4.47□□□□□ -1.69
RFC1-208ENST00000504849 PIP4K2AP48426 406 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms