RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 SLC44A3Q8N4M1 653 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 CCDC185Q8N715 623 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 TPCN2Q8NHX9 752 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 ZNF564Q8TBZ8 553 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 SH3RF2Q8TEC5 729 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 EZH1Q92800 747 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 NTAN1Q96AB6 310 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 FAM149B1Q96BN6 582 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 TRIM11Q96F44 468 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 LMLNQ96KR4 655 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 PRICKLE1Q96MT3 831 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 CNPY3Q9BT09 278 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 NUP85Q9BW27 656 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 IRX2Q9BZI1 471 aaPredicted RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 PDCL3Q9H2J4 239 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 LINC00597Q9H2U6 94 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 GOLPH3Q9H4A6 298 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 OLA1Q9NTK5 396 aaKnown RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 SEPT11Q9NVA2 429 aaKnown RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 AGO1Q9UL18 857 aaKnown RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 HBS1LQ9Y450 684 aaKnown RBP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.14□□□□□ -1.59
LMNB1-208ENST00000504788 SCINQ9Y6U3 715 aa5.14□□□□□ -1.59
LMNB1-208ENST00000504788 IGLV3-10A0A075B6K4 115 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 TRAV19A0A0A6YYK7 116 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 E2F8A0AVK6 867 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 GRID2IPA4D2P6 1211 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 C3orf70A6NLC5 250 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SCAMP3O14828 347 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 BUB1BO60566 1050 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PROSCO94903 275 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ASGR2P07307 311 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PSMC3P17980 439 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SP100P23497 879 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MIPP30301 263 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 HOXC13P31276 330 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MAN1A1P33908 653 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PCK1P35558 622 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PEX5P50542 639 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SGSHP51688 502 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MLLT6P55198 1093 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 RNASE9P60153 205 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ATP11AP98196 1134 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 NRG1Q02297 640 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 FZD5Q13467 585 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ACAP1Q15027 740 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SKIV2LQ15477 1246 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 TAZQ16635 292 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CA9Q16790 459 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 TSR1Q2NL82 804 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ATP13A4Q4VNC1 1196 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ZC3H12AQ5D1E8 599 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MS4A13Q5J8X5 152 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 FYB2Q5VWT5 728 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 NAIF1Q69YI7 327 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 DNAJC24Q6P3W2 148 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 RHBDF2Q6PJF5 856 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 EP400NLQ6ZTU2 488 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 FAM131BQ86XD5 332 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 RHOT2Q8IXI1 618 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ETFBKMTQ8IXQ9 262 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PHTF2Q8N3S3 785 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CELF5Q8N6W0 485 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 OR52K2Q8NGK3 314 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 KIAA1524Q8TCG1 905 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 FAM172AQ8WUF8 416 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CTNNBL1Q8WYA6 563 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 TSC1Q92574 1164 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 VOPP1Q96AW1 172 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ZFYVE19Q96K21 471 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 C1orf74Q96LT6 269 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SERPINB11Q96P15 392 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 NECAB3Q96P71 396 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CDK5RAP1Q96SZ6 601 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 KLC2Q9H0B6 622 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 KIF9Q9HAQ2 790 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MRPL47Q9HD33 250 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 TRPV5Q9NQA5 729 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SMPD4Q9NXE4 827 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 RRN3Q9NYV6 651 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MARK1Q9P0L2 795 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MYO1AQ9UBC5 1043 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 LIMD1Q9UGP4 676 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ANAPC7Q9UJX3 599 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 FBXO10Q9UK96 956 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 HCN2Q9UL51 889 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CLEC4EQ9ULY5 219 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PPP2R2CQ9Y2T4 447 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 CKAP5Q14008 2032 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 GOLGA6L7A0A1B0GV03 622 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 SLC12A8A0AV02 714 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 ANTXRLA6NF34 631 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 NARSO43776 548 aaKnown RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PAGE1O75459 146 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 LATS1O95835 1130 aa5.13□□□□□ -1.59
LMNB1-208ENST00000504788 PENKP01210 267 aaPredicted RBP5.13□□□□□ -1.59
LMNB1-208ENST00000504788 MBL2P11226 248 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms