RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 PHACTR2O75167 634 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 KLKB1P03952 638 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 C7P10643 843 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 CCDC130P13994 396 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 COG7P83436 770 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 PSMD6Q15008 389 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 FNDC3BQ53EP0 1204 aaKnown RBP16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 ARHGAP40Q5TG30 622 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 TMEM215Q68D42 235 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 KIAA0895LQ68EN5 471 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 LURAP1LQ8IV03 231 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 SLC2A14Q8TDB8 520 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 ORAI3Q9BRQ5 295 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 SEMA4CQ9C0C4 833 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 XYLT2Q9H1B5 865 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 PLA2G4CQ9UP65 541 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 NCKAP1Q9Y2A7 1128 aa16.6■□□□□ 0.25
PDLIM7-210ENST00000503827 A0A1W2PPC4 97 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 IGHV4-34P06331 123 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 CORO1AP31146 461 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 ARRB1P49407 418 aaPredicted RBP16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 PSEN1P49768 467 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 PCBP4P57723 403 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 RPS14P62263 151 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 LY6DQ14210 128 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 SHBQ15464 509 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 ZNF667Q5HYK9 610 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 DDI1Q8WTU0 396 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 GOLGA1Q92805 767 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 NAF1Q96HR8 494 aaKnown RBP16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 SLC6A18Q96N87 628 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 TMEM245Q9H330 911 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 VRTNQ9H8Y1 702 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 CPNE5Q9HCH3 593 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 NAGPAQ9UK23 515 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 CLEC4EQ9ULY5 219 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 PCDHA5Q9Y5H7 936 aa16.59■□□□□ 0.25
PDLIM7-210ENST00000503827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 SLC28A2O43868 658 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 FAM200BP0CF97 657 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 RALAP11233 206 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 CKMT2P17540 419 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 TXLNAP40222 546 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 CYP24A1Q07973 514 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF699Q32M78 642 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 GPRIN1Q7Z2K8 1008 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 CCDC65Q8IXS2 484 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 CPXM2Q8N436 756 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF276Q8N554 614 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF366Q8N895 744 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 DCBLD1Q8N8Z6 715 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 RFFLQ8WZ73 363 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF516Q92618 1163 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 JAKMIP2Q96AA8 810 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF578Q96N58 590 aaPredicted RBP16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 CDK5RAP1Q96SZ6 601 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 GDF3Q9NR23 364 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 AASDHPPTQ9NRN7 309 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 RASAL2Q9UJF2 1139 aa16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 AGO1Q9UL18 857 aaKnown RBP16.58■□□□□ 0.24
PDLIM7-210ENST00000503827 FAM47DPA6NHR8 397 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 HMBSP08397 361 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 TRIM21P19474 475 aaKnown RBP16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 CD38P28907 300 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 EPHA8P29322 1005 aaPredicted RBP16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 BMT2Q1RMZ1 405 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 CRYBG2Q8N1P7 616 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 GANCQ8TET4 914 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 CYB5D2Q8WUJ1 264 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 PRSS16Q9NQE7 514 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 FAM49BQ9NUQ9 324 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 ADAMTS1Q9UHI8 967 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 SPTA1P02549 2419 aa16.57■□□□□ 0.24
PDLIM7-210ENST00000503827 WNT1P04628 370 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 ADORA2BP29275 332 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 INSM1Q01101 510 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 PDE4CQ08493 712 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 BIRC3Q13489 604 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 ZNF776Q68DI1 518 aaPredicted RBP16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 KDM7AQ6ZMT4 941 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 CLEC20AQ6ZU45 233 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 USP30Q70CQ3 517 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 DENND1CQ8IV53 801 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 DHX40Q8IX18 779 aaKnown RBP16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 OXR1Q8N573 874 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 WFIKKN2Q8TEU8 576 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 TTC9Q92623 222 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 MED8Q96G25 268 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 SDCBP2Q9H190 292 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 PNPLA8Q9NP80 782 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 CLIC5Q9NZA1 410 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 SUN2Q9UH99 717 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 SCML1Q9UN30 329 aa16.56■□□□□ 0.24
PDLIM7-210ENST00000503827 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 HHLA1C9JL84 531 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 P4HA1P13674 534 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 GJB2P29033 226 aa16.55■□□□□ 0.24
PDLIM7-210ENST00000503827 STAT6P42226 847 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms