RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 SNRPAP09012 282 aaKnown RBP16.93■□□□□ 0.3
COL6A1-206ENST00000498614 AP2B1P63010 937 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 YWHAZP63104 245 aaKnown RBP16.93■□□□□ 0.3
COL6A1-206ENST00000498614 CDC16Q13042 620 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 UBAP2LQ14157 1087 aaKnown RBP16.93■□□□□ 0.3
COL6A1-206ENST00000498614 GOLGA7BQ2TAP0 167 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.93■□□□□ 0.3
COL6A1-206ENST00000498614 AFG1LQ8WV93 481 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 FAF2Q96CS3 445 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 KIF12Q96FN5 646 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 PLAC1Q9HBJ0 212 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 SMYD2Q9NRG4 433 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 ASB14A6NK59 587 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 CRABP2P29373 138 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 APLP1P51693 650 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 RBP5P82980 135 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 POU5F1BQ06416 359 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 INCA1Q0VD86 236 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 CRHR2Q13324 411 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 KRT81Q14533 505 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 C6orf163Q5TEZ5 329 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 ATG16L1Q676U5 607 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 LCLAT1Q6UWP7 414 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 NUDCD3Q8IVD9 361 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 LRRN4Q8WUT4 740 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 MTBPQ96DY7 904 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 CAPNS2Q96L46 248 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 NT5C1AQ9BXI3 368 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 PNPLA8Q9NP80 782 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 ITGA11Q9UKX5 1188 aa16.93■□□□□ 0.3
COL6A1-206ENST00000498614 CITO14578 2027 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 DNAH12Q6ZR08 3092 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 TSPAN1O60635 241 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 SPAG6O75602 509 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 KRT37O76014 449 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 ENDOD1O94919 500 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 STIP1P31948 543 aaKnown RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 LAMC2Q13753 1193 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 DNAL1Q4LDG9 190 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 PPP1R26Q5T8A7 1209 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 SMYD5Q6GMV2 418 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 TAPT1Q6NXT6 567 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 RAPH1Q70E73 1250 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 IFNLR1Q8IU57 520 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 TRIM42Q8IWZ5 723 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 EBF4Q9BQW3 602 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 NGRNQ9NPE2 291 aaKnown RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 RAB6BQ9NRW1 208 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 HBS1LQ9Y450 684 aaKnown RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 DOCK3Q8IZD9 2030 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 BUD23O43709 281 aaKnown RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 RNASEH1O60930 286 aaKnown RBP16.92■□□□□ 0.3
COL6A1-206ENST00000498614 GSTT1P30711 240 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 CNPY1Q3B7I2 92 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 CCDC14Q49A88 953 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 FAXCQ5TGI0 409 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 AZIN2Q96A70 460 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 RILPQ96NA2 401 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 RNF157Q96PX1 679 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 GORASP1Q9BQQ3 440 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 POPDC2Q9HBU9 364 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 FAM49BQ9NUQ9 324 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 HEY1Q9Y5J3 304 aa16.92■□□□□ 0.3
COL6A1-206ENST00000498614 TRIP11Q15643 1979 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 ADORA2AP29274 412 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CCNFP41002 786 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 ADCYAP1R1P41586 468 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CCNA1P78396 465 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 TFDP2Q14188 446 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 FAM110CQ1W6H9 321 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 PMF1Q6P1K2 205 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 MAMDC4Q6UXC1 1216 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 ZCCHC23Q6ZST2 131 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 ACOT1Q86TX2 421 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CRLF3Q8IUI8 442 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 GSTCDQ8NEC7 633 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 MRPL45Q9BRJ2 306 aaKnown RBP16.91■□□□□ 0.3
COL6A1-206ENST00000498614 EBF3Q9H4W6 596 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 GPAMQ9HCL2 828 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 MORF4L1Q9UBU8 362 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 ZC3H7BQ9UGR2 993 aaKnown RBP16.91■□□□□ 0.3
COL6A1-206ENST00000498614 A0A088AWK7 358 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 PPEF2O14830 753 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CHADO15335 359 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 KCNN4O15554 427 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 TOP3BO95985 862 aaKnown RBP16.91■□□□□ 0.3
COL6A1-206ENST00000498614 C6orf222P0C671 652 aaPredicted RBP16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CPOXP36551 454 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 PDE1BQ01064 536 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CA9Q16790 459 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 TMCO4Q5TGY1 634 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 GPR142Q7Z601 462 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 FAM172AQ8WUF8 416 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 TRIM56Q9BRZ2 755 aaKnown RBP16.91■□□□□ 0.3
COL6A1-206ENST00000498614 CREBZFQ9NS37 354 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 RNF19AQ9NV58 838 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 DNAJB4Q9UDY4 337 aa16.91■□□□□ 0.3
COL6A1-206ENST00000498614 ZNF180Q9UJW8 692 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms