RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ZNF366Q8N895 744 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 OR2T3Q8NH03 318 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 DDI1Q8WTU0 396 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 CRELD1Q96HD1 420 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 PCED1AQ9H1Q7 454 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 MARCH2Q9P0N8 246 aa15.4■□□□□ 0.06
TRAF4-212ENST00000498540 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.4■□□□□ 0.06
TRAF4-212ENST00000498540 SLC12A8A0AV02 714 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 KCNK3O14649 394 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 TRIM49P0CI25 452 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 TRIM49CP0CI26 452 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 CAMK2GQ13555 558 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-212ENST00000498540 KMT5BQ4FZB7 885 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 FOXD4L5Q5VV16 416 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-212ENST00000498540 FAM217AQ8IXS0 508 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 TAS1R2Q8TE23 839 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 FOXD4L4Q8WXT5 416 aaPredicted RBP15.39■□□□□ 0.05
TRAF4-212ENST00000498540 SLC2A11Q9BYW1 496 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 IMPG2Q9BZV3 1241 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 NIF3L1Q9GZT8 377 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 LHX5Q9H2C1 402 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 CYP3A43Q9HB55 503 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 TM9SF3Q9HD45 589 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 EXOC1Q9NV70 894 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 ANKRD6Q9Y2G4 727 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 PLXNA2O75051 1894 aa15.39■□□□□ 0.05
TRAF4-212ENST00000498540 PDXKO00764 312 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 HOXD9P28356 352 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-212ENST00000498540 HLA-FP30511 346 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 GCLMP48507 274 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 VAMP7P51809 220 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 ARID5AQ03989 594 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 PPP3CAQ08209 521 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 SUZ12Q15022 739 aaKnown RBP15.38■□□□□ 0.05
TRAF4-212ENST00000498540 E2F5Q15329 346 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 PTPRNQ16849 979 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 FOXD4L6Q3SYB3 417 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-212ENST00000498540 ZNF394Q53GI3 561 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 CCDC157Q569K6 752 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 KCNT1Q5JUK3 1230 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 RESP18Q5W5W9 173 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 FOXD4L3Q6VB84 417 aaPredicted RBP15.38■□□□□ 0.05
TRAF4-212ENST00000498540 RSRC2Q7L4I2 434 aaKnown RBP15.38■□□□□ 0.05
TRAF4-212ENST00000498540 GALNT15Q8N3T1 639 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 CYB5D2Q8WUJ1 264 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 ARID3AQ99856 593 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 TMEM245Q9H330 911 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 FAM13BQ9NYF5 915 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 SERTAD1Q9UHV2 236 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 STRIP2Q9ULQ0 834 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 PCDHA7Q9UN72 937 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 FRMD4BQ9Y2L6 1034 aa15.38■□□□□ 0.05
TRAF4-212ENST00000498540 SETXQ7Z333 2677 aaKnown RBP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 H0Y8X5 98 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 TNFSF14O43557 240 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 TIMM44O43615 452 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 ACTN4O43707 911 aaKnown RBP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 SEMA4FO95754 770 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 GRK6P43250 576 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 GRIA4P48058 902 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 YWHAGP61981 247 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 IL9RQ01113 521 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 TEAD4Q15561 434 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 SMAD1Q15797 465 aaKnown RBP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 FNDC3BQ53EP0 1204 aaKnown RBP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 RAB41Q5JT25 222 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 PIGZQ86VD9 579 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 CEP57L1Q8IYX8 460 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 NDRG1Q92597 394 aaKnown RBP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 IGSF8Q969P0 613 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 PLD4Q96BZ4 506 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 BIRC7Q96CA5 298 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
TRAF4-212ENST00000498540 MMRN2Q9H8L6 949 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 OSGEPQ9NPF4 335 aa15.37■□□□□ 0.05
TRAF4-212ENST00000498540 A0A087WV48 116 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 PCDHGA12O60330 932 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 TSPAN3O60637 253 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 FSBPO95073 299 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 SLFN14P0C7P3 912 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 C7P10643 843 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 PDIA4P13667 645 aaKnown RBP15.36■□□□□ 0.05
TRAF4-212ENST00000498540 ME1P48163 572 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 CCT8P50990 548 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 RPS14P62263 151 aaKnown RBP15.36■□□□□ 0.05
TRAF4-212ENST00000498540 TRIP4Q15650 581 aaPredicted RBP15.36■□□□□ 0.05
TRAF4-212ENST00000498540 DHRS13Q6UX07 377 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 CHST9Q7L1S5 443 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 BHLHA9Q7RTU4 235 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 SCUBE3Q8IX30 993 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 ZC3H3Q8IXZ2 948 aaKnown RBP15.36■□□□□ 0.05
TRAF4-212ENST00000498540 ARHGAP18Q8N392 663 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 PAGE5Q96GU1 130 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 ORAI3Q9BRQ5 295 aa15.36■□□□□ 0.05
TRAF4-212ENST00000498540 ASXL3Q9C0F0 2248 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 MAPK13O15264 365 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 CD27P26842 260 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 CTSKP43235 329 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 SGSHP51688 502 aa15.35■□□□□ 0.05
TRAF4-212ENST00000498540 TKTL1P51854 596 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms