RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 PAGE5Q96GU1 130 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 DCLK3Q9C098 648 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 FAM13BQ9NYF5 915 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 MARCH2Q9P0N8 246 aa16.83■□□□□ 0.28
MUC1-220ENST00000498431 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
MUC1-220ENST00000498431 GOLGA4Q13439 2230 aaKnown RBP16.82■□□□□ 0.28
MUC1-220ENST00000498431 KALRNO60229 2985 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 SLC12A8A0AV02 714 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 KCNK3O14649 394 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 FLRT2O43155 660 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 SLFN14P0C7P3 912 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 TRIM21P19474 475 aaKnown RBP16.82■□□□□ 0.28
MUC1-220ENST00000498431 EIF4HQ15056 248 aaKnown RBP16.82■□□□□ 0.28
MUC1-220ENST00000498431 KIF19Q2TAC6 998 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 FAM217AQ8IXS0 508 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 CPXM2Q8N436 756 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 OR2T3Q8NH03 318 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 DDI1Q8WTU0 396 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 CYB5D2Q8WUJ1 264 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 LRIG1Q96JA1 1093 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 CDK5RAP1Q96SZ6 601 aaKnown RBP16.82■□□□□ 0.28
MUC1-220ENST00000498431 IMPG2Q9BZV3 1241 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 MMRN2Q9H8L6 949 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 FRMD4BQ9Y2L6 1034 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 PCDHGB2Q9Y5G2 931 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
MUC1-220ENST00000498431 SETXQ7Z333 2677 aaKnown RBP16.82■□□□□ 0.28
MUC1-220ENST00000498431 URB1O60287 2271 aaKnown RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 FAM149AA5PLN7 773 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 TSPAN3O60637 253 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 CYBBP04839 570 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 PDIA4P13667 645 aaKnown RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 HOXD9P28356 352 aaPredicted RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 CAMK2GQ13555 558 aaPredicted RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 KCNT1Q5JUK3 1230 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 NDRG1Q92597 394 aaKnown RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 CRELD1Q96HD1 420 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 CDC6Q99741 560 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 ARID3AQ99856 593 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 LHX5Q9H2C1 402 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 TM9SF3Q9HD45 589 aa16.81■□□□□ 0.28
MUC1-220ENST00000498431 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.81■□□□□ 0.28
MUC1-220ENST00000498431 TRABD2BA6NFA1 517 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 HLA-FP30511 346 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 AFF3P51826 1226 aaKnown RBP16.8■□□□□ 0.28
MUC1-220ENST00000498431 YWHAGP61981 247 aaKnown RBP eCLIP16.8■□□□□ 0.28
MUC1-220ENST00000498431 CYP4F3Q08477 520 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 CAMK2BQ13554 666 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 RAB41Q5JT25 222 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 RSRC2Q7L4I2 434 aaKnown RBP16.8■□□□□ 0.28
MUC1-220ENST00000498431 BHLHA9Q7RTU4 235 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 PIGZQ86VD9 579 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 ZC3H3Q8IXZ2 948 aaKnown RBP16.8■□□□□ 0.28
MUC1-220ENST00000498431 SLC4A11Q8NBS3 891 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 SEMA4DQ92854 862 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 HEXIM2Q96MH2 286 aaKnown RBP16.8■□□□□ 0.28
MUC1-220ENST00000498431 SLC2A11Q9BYW1 496 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 PCED1AQ9H1Q7 454 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 TMEM245Q9H330 911 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 DKK4Q9UBT3 224 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 ANKRD6Q9Y2G4 727 aa16.8■□□□□ 0.28
MUC1-220ENST00000498431 TP53BP1Q12888 1972 aaPredicted RBP16.79■□□□□ 0.28
MUC1-220ENST00000498431 TULP2O00295 520 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 MAPK13O15264 365 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 ARID5AQ03989 594 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 TRIP4Q15650 581 aaPredicted RBP16.79■□□□□ 0.28
MUC1-220ENST00000498431 PTPRNQ16849 979 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 FNDC3BQ53EP0 1204 aaKnown RBP16.79■□□□□ 0.28
MUC1-220ENST00000498431 BIRC7Q96CA5 298 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 SCUBE2Q9NQ36 999 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 STRIP2Q9ULQ0 834 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 TRAF3IP3Q9Y228 551 aa16.79■□□□□ 0.28
MUC1-220ENST00000498431 H0Y8X5 98 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 TIMM44O43615 452 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 CALUO43852 315 aaPredicted RBP16.78■□□□□ 0.28
MUC1-220ENST00000498431 C7P10643 843 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 NR2F2P24468 414 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 SGSHP51688 502 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 TKTL1P51854 596 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 RAD23BP54727 409 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 IL9RQ01113 521 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 MPPE1Q53F39 396 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 CCDC157Q569K6 752 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 CHST9Q7L1S5 443 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 ADIPOR2Q86V24 386 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 FMNL3Q8IVF7 1028 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 ARHGAP18Q8N392 663 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 WFDC5Q8TCV5 224 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 PLD4Q96BZ4 506 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 ORAI3Q9BRQ5 295 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 ULBP1Q9BZM6 244 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 PRSS16Q9NQE7 514 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 ABCB8Q9NUT2 735 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 MAPK8IP1Q9UQF2 711 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 PLXNA2O75051 1894 aa16.78■□□□□ 0.28
MUC1-220ENST00000498431 TNFSF14O43557 240 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms