RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 CNPPD1Q9BV87 410 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 SETD4Q9NVD3 440 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 ADAMTS6Q9UKP5 1117 aa6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 NAP1L2Q9ULW6 460 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 TIMM13Q9Y5L4 95 aaPredicted RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 SPTBN5Q9NRC6 3674 aaKnown RBP6.35□□□□□ -1.39
TMEM39A-212ENST00000497993 DENND4AQ7Z401 1863 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 DOCK8Q8NF50 2099 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 MAGEB2O15479 319 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 SLC37A4O43826 429 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TDP2O95551 362 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 AMY2AP04746 511 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 CLEC2LP0C7M8 214 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 LINC00271P0C7V0 271 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 CKMT1AP12532 417 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 AMY2BP19961 511 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 U2AF2P26368 475 aaKnown RBP eCLIP6.34□□□□□ -1.391e-9■■■■□ 21.9
TMEM39A-212ENST00000497993 ATICP31939 592 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 KRT2P35908 639 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 SERPINF1P36955 418 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 STAT1P42224 750 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 FNTBP49356 437 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 RPL11P62913 178 aaKnown RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 MRPS6P82932 125 aaKnown RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TEKQ02763 1124 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TRPC3Q13507 836 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 CUL4AQ13619 759 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 INF2Q27J81 1249 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TCTN1Q2MV58 587 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 LRCH2Q5VUJ6 765 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 KRT40Q6A162 431 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 MTHFD1LQ6UB35 978 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 OTOP2Q7RTS6 562 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 RSPH3Q86UC2 560 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 HEATR4Q86WZ0 1026 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 SNX32Q86XE0 403 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 HERC6Q8IVU3 1022 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TXLNBQ8N3L3 684 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 NECAB1Q8N987 351 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 FBXO18Q8NFZ0 1043 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 NEK9Q8TD19 979 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 DLG3Q92796 817 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 GLG1Q92896 1179 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 MTMR9Q96QG7 549 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TEKT3Q9BXF9 490 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 FTHL17Q9BXU8 183 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 ACE2Q9BYF1 805 aaPredicted RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 FOXP1Q9H334 677 aaPredicted RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 PRDM7Q9NQW5 492 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 ZNF302Q9NR11 478 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 GJB4Q9NTQ9 266 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 CLDND1Q9NY35 253 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 AASSQ9UDR5 926 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 DDX25Q9UHL0 483 aaKnown RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TCFL5Q9UL49 500 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 SLC39A10Q9ULF5 831 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 SRPK3Q9UPE1 567 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 YBX2Q9Y2T7 364 aaKnown RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 ZNF281Q9Y2X9 895 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 TCF20Q9UGU0 1960 aaKnown RBP6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
TMEM39A-212ENST00000497993 VWA8A3KMH1 1905 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 VCANP13611 3396 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 A0A1W2PPL8 197 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 H7BY64 318 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 BIN1O00499 593 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 SCDO00767 359 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ATP1A3P13637 1013 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 GLULP15104 373 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 MUTP22033 750 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 GDNFP39905 211 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 THPOP40225 353 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 WASP42768 502 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 CTSKP43235 329 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 CLK1P49759 484 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 MAP2K6P52564 334 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 DRG2P55039 364 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 DEFB103AP81534 67 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 PLIN5Q00G26 463 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 PRKCEQ02156 737 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 EFR3AQ14156 821 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 LPIN1Q14693 890 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 CNGA2Q16280 664 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 MEA1Q16626 185 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 UGCGQ16739 394 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 XKR3Q5GH77 459 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 PITRM1Q5JRX3 1037 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 UTP14CQ5TAP6 766 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 TIGD7Q6NT04 549 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 Q7L0L9 218 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ATG4DQ86TL0 474 aaPredicted RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 PHYKPLQ8IUZ5 450 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 C4orf19Q8IY42 314 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 DIS3L2Q8IYB7 885 aaKnown RBP6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 NLGN4XQ8N0W4 816 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ZMIZ2Q8NF64 920 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 DBF4BQ8NFT6 615 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 SEPT8Q92599 483 aa6.33□□□□□ -1.4
TMEM39A-212ENST00000497993 ERCC4Q92889 916 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms