RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ARL14EPQ8N8R7 260 aaPredicted RBP4.53□□□□□ -1.68
SMC4-227ENST00000497984 EME1Q96AY2 570 aa4.53□□□□□ -1.68
SMC4-227ENST00000497984 ZNF845Q96IR2 970 aaPredicted RBP4.53□□□□□ -1.68
SMC4-227ENST00000497984 NTPCRQ9BSD7 190 aaKnown RBP4.53□□□□□ -1.68
SMC4-227ENST00000497984 TTLL2Q9BWV7 592 aa4.53□□□□□ -1.68
SMC4-227ENST00000497984 FZD3Q9NPG1 666 aa4.53□□□□□ -1.68
SMC4-227ENST00000497984 ZNF212Q9UDV6 495 aa4.53□□□□□ -1.68
SMC4-227ENST00000497984 ANAPC4Q9UJX5 808 aa4.53□□□□□ -1.68
SMC4-227ENST00000497984 IFITM10A6NMD0 228 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 A6NNC1 897 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 TNFRSF13BO14836 293 aaPredicted RBP4.52□□□□□ -1.69
SMC4-227ENST00000497984 ARP10275 920 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 FAM90A2PQ658T7 463 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 CAPRIN2Q6IMN6 1127 aaKnown RBP4.52□□□□□ -1.69
SMC4-227ENST00000497984 PDXDC1Q6P996 788 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 KYAT3Q6YP21 454 aaKnown RBP4.52□□□□□ -1.69
SMC4-227ENST00000497984 TRAPPC11Q7Z392 1133 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 SPATA2LQ8IUW3 424 aaPredicted RBP4.52□□□□□ -1.69
SMC4-227ENST00000497984 OIT3Q8WWZ8 545 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 SNX22Q96L94 193 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
SMC4-227ENST00000497984 FAM204AQ9H8W3 233 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 TXLNGQ9NUQ3 528 aa4.52□□□□□ -1.69
SMC4-227ENST00000497984 CKAP5Q14008 2032 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 SHROOM4Q9ULL8 1493 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 A0A087WZ62 844 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 TTC34A8MYJ7 566 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 F8W8V4 182 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 IL18RAPO95256 599 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 WNT1P04628 370 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 U2AF1L5P0DN76 240 aaPredicted RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 CHRNB1P11230 501 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 MATN1P21941 496 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 IGHMBP2P38935 993 aaKnown RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 U2AF1Q01081 240 aaKnown RBP eCLIP4.51□□□□□ -1.695e-12■■■■■ 47.2
SMC4-227ENST00000497984 DMWDQ09019 674 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 KRTAP27-1Q3LI81 207 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 MINDY4Q4G0A6 757 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 FAM102BQ5T8I3 360 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 ABLIM2Q6H8Q1 611 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 RBM23Q86U06 439 aaKnown RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 RHPN2Q8IUC4 686 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 SDR16C5Q8N3Y7 309 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 FAM156AQ8NDB6 213 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 NUDCD2Q8WVJ2 157 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 KAT2BQ92831 832 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 ATP2A3Q93084 1043 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 WDR83Q9BRX9 315 aaKnown RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 RXFP3Q9NSD7 469 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 TBC1D23Q9NUY8 699 aa4.51□□□□□ -1.69
SMC4-227ENST00000497984 DDX20Q9UHI6 824 aaKnown RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 NOB1Q9ULX3 412 aaKnown RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 THRAP3Q9Y2W1 955 aaKnown RBP4.51□□□□□ -1.69
SMC4-227ENST00000497984 EMSYQ7Z589 1322 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 H0YGN5 161 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 HRGP04196 525 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 FGF3P11487 239 aaPredicted RBP4.5□□□□□ -1.69
SMC4-227ENST00000497984 STAT6P42226 847 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 LTBQ06643 244 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 KEAP1Q14145 624 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 ZNF474Q6S9Z5 364 aaPredicted RBP4.5□□□□□ -1.69
SMC4-227ENST00000497984 SKAP1Q86WV1 359 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 RAVER1Q8IY67 606 aaKnown RBP4.5□□□□□ -1.69
SMC4-227ENST00000497984 LMLNQ96KR4 655 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 CD93Q9NPY3 652 aa4.5□□□□□ -1.69
SMC4-227ENST00000497984 GOLIM4O00461 696 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 ACOT8O14734 319 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 SGPL1O95470 568 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 ENO1P06733 434 aaKnown RBP4.49□□□□□ -1.69
SMC4-227ENST00000497984 SLC3A2P08195 630 aaKnown RBP4.49□□□□□ -1.69
SMC4-227ENST00000497984 DRD1P21728 446 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 ATICP31939 592 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 C6orf10Q5SRN2 563 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 CCDC149Q6ZUS6 474 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 KRT28Q7Z3Y7 464 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 ZFPM2Q8WW38 1151 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 ASB12Q8WXK4 309 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 MED30Q96HR3 178 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 AAMDCQ9H7C9 122 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 HEYLQ9NQ87 328 aaPredicted RBP4.49□□□□□ -1.69
SMC4-227ENST00000497984 GJB4Q9NTQ9 266 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 UTS2RQ9UKP6 389 aa4.49□□□□□ -1.69
SMC4-227ENST00000497984 TPP1O14773 563 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 ZBED1O96006 694 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 IFNA2P01563 188 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 ANXA2P07355 339 aaKnown RBP4.48□□□□□ -1.69
SMC4-227ENST00000497984 AKR1A1P14550 325 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 PEX2P28328 305 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 MLH1P40692 756 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 AGTR2P50052 363 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 BFSP2Q13515 415 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 KIAA0753Q2KHM9 967 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 ARHGAP29Q52LW3 1261 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 TMEM196Q5HYL7 178 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 LIPMQ5VYY2 423 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 DARS2Q6PI48 645 aaKnown RBP4.48□□□□□ -1.69
SMC4-227ENST00000497984 DHRS13Q6UX07 377 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 RNF44Q7L0R7 432 aa4.48□□□□□ -1.69
SMC4-227ENST00000497984 CHST15Q7LFX5 561 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms