RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 PTPN20Q4JDL3 420 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 FAM133BQ5BKY9 247 aaKnown RBP19.44■□□□□ 0.7
RPN1-208ENST00000497415 EFHC1Q5JVL4 640 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 EGFLAMQ63HQ2 1017 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 RNF43Q68DV7 783 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 OLFML1Q6UWY5 402 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 CEP68Q76N32 757 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 TAC4Q86UU9 113 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 AOPEPQ8N6M6 819 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 TMEM35BQ8NCS4 154 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 TMA16Q96EY4 203 aaKnown RBP19.44■□□□□ 0.7
RPN1-208ENST00000497415 SLC2A13Q96QE2 648 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 ERGIC2Q96RQ1 377 aa19.44■□□□□ 0.7
RPN1-208ENST00000497415 POLMQ9NP87 494 aaPredicted RBP19.44■□□□□ 0.7
RPN1-208ENST00000497415 EPHB6O15197 1021 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 IRAK2O43187 625 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 TSPAN3O60637 253 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 TRUB2O95900 331 aaKnown RBP19.43■□□□□ 0.7
RPN1-208ENST00000497415 SLC11A2P49281 568 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 POLR2FP61218 127 aaKnown RBP19.43■□□□□ 0.7
RPN1-208ENST00000497415 SYCP1Q15431 976 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 LPAL2Q16609 132 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 GEN1Q17RS7 908 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 MPP7Q5T2T1 576 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 PIK3R6Q5UE93 754 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 FAM183BPQ6ZVS7 135 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 NOP9Q86U38 636 aaKnown RBP19.43■□□□□ 0.7
RPN1-208ENST00000497415 ADAM32Q8TC27 787 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 EPS8L1Q8TE68 723 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 ZC3H10Q96K80 434 aaKnown RBP19.43■□□□□ 0.7
RPN1-208ENST00000497415 ACOX2Q99424 681 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 HINFPQ9BQA5 517 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 FUCA2Q9BTY2 467 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 FAM207AQ9NSI2 230 aaPredicted RBP19.43■□□□□ 0.7
RPN1-208ENST00000497415 GMEB2Q9UKD1 530 aa19.43■□□□□ 0.7
RPN1-208ENST00000497415 GOLGA6L7A0A1B0GV03 622 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 HSF2BPO75031 334 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 ALDH1A2O94788 518 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 RETP07949 1114 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 TGM1P22735 817 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 SLC6A4P31645 630 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 GABRB2P47870 512 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 PITX1P78337 314 aaPredicted RBP19.42■□□□□ 0.7
RPN1-208ENST00000497415 SLC6A3Q01959 620 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 UBXN1Q04323 297 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 KLHL40Q2TBA0 621 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 DCAF6Q58WW2 860 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 NADSYN1Q6IA69 706 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 OR6B2Q6IFH4 312 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 ANO7Q6IWH7 933 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 CACNA2D4Q7Z3S7 1137 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 ZNF677Q86XU0 584 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 ZDHHC17Q8IUH5 632 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 DHX40Q8IX18 779 aaKnown RBP19.42■□□□□ 0.7
RPN1-208ENST00000497415 DEFB106AQ8N104 65 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 FAM160A2Q8N612 972 aaPredicted RBP19.42■□□□□ 0.7
RPN1-208ENST00000497415 ZNF397Q8NF99 534 aaPredicted RBP19.42■□□□□ 0.7
RPN1-208ENST00000497415 MDGA1Q8NFP4 955 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 OLIG1Q8TAK6 271 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 IPO4Q8TEX9 1081 aaKnown RBP19.42■□□□□ 0.7
RPN1-208ENST00000497415 GABRG3Q99928 467 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 PDCL3Q9H2J4 239 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 CD248Q9HCU0 757 aa19.42■□□□□ 0.7
RPN1-208ENST00000497415 FRYLO94915 3013 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 SMTNL1A8MU46 457 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 LSM8O95777 96 aaKnown RBP19.41■□□□□ 0.7
RPN1-208ENST00000497415 ATP1A3P13637 1013 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 HOXB2P14652 356 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 SOX5P35711 763 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 SGSHP51688 502 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 TAF3Q5VWG9 929 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 RFWD3Q6PCD5 774 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 SLC26A9Q7LBE3 791 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 ANKS1BQ7Z6G8 1248 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 KIAA0907Q7Z7F0 614 aaPredicted RBP19.41■□□□□ 0.7
RPN1-208ENST00000497415 KBTBD6Q86V97 674 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 GPR161Q8N6U8 529 aaKnown RBP19.41■□□□□ 0.7
RPN1-208ENST00000497415 NEK11Q8NG66 645 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 LOXL4Q96JB6 756 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 DDX50Q9BQ39 737 aaKnown RBP19.41■□□□□ 0.7
RPN1-208ENST00000497415 NLRC4Q9NPP4 1024 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 NOCTQ9UK39 431 aaKnown RBP19.41■□□□□ 0.7
RPN1-208ENST00000497415 CFAP54Q96N23 3096 aa19.41■□□□□ 0.7
RPN1-208ENST00000497415 A0A1W2PQF6 199 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 NPC1O15118 1278 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 GFPT2O94808 682 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 MMEP08473 750 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 SCNN1AP37088 669 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 WASP42768 502 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 CDK17Q00537 523 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 ENPP2Q13822 863 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 EIF4HQ15056 248 aaKnown RBP19.4■□□□□ 0.7
RPN1-208ENST00000497415 PLK5Q496M5 336 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 USP39Q53GS9 565 aaKnown RBP19.4■□□□□ 0.7
RPN1-208ENST00000497415 TMEM215Q68D42 235 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 SDE2Q6IQ49 451 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.4■□□□□ 0.7
RPN1-208ENST00000497415 CHPFQ8IZ52 775 aa19.4■□□□□ 0.7
RPN1-208ENST00000497415 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.4■□□□□ 0.7
RPN1-208ENST00000497415 C18orf8Q96DM3 657 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms