RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 BFSP1Q12934 665 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 PDE1CQ14123 709 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 STXBP5Q5T5C0 1151 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 LDLRAD1Q5T700 205 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 KRT39Q6A163 491 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 KRT80Q6KB66 452 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 OGFOD2Q6N063 350 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 RGMBQ6NW40 437 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 POTEBQ6S5H4 581 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 C16orf89Q6UX73 402 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 AGMOQ6ZNB7 445 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 PALM2Q8IXS6 379 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 PPIL6Q8IXY8 311 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 TNIP2Q8NFZ5 429 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 PIWIL2Q8TC59 973 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 TMEM174Q8WUU8 243 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 CCDC124Q96CT7 223 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 CAPNS2Q96L46 248 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 RPF2Q9H7B2 306 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 EBF1Q9UH73 591 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 ANAPC7Q9UJX3 599 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 PRELID1Q9Y255 219 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 TBCAO75347 108 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 STAMBPO95630 424 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 ITGAVP06756 1048 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 INHBAP08476 426 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 MCF2P10911 925 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 ZNF26P17031 533 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 GNL1P36915 607 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 CAP2P40123 477 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 FMO1Q01740 532 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 GK3PQ14409 553 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 TTC39BQ5VTQ0 682 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 CPSF7Q8N684 471 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 CLIP3Q96DZ5 547 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 MRRFQ96E11 262 aaKnown RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 MED30Q96HR3 178 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 TUBA1CQ9BQE3 449 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 ANKRD60Q9BZ19 345 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 ANKMY1Q9P2S6 941 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 CRNNQ9UBG3 495 aaPredicted RBP9.33□□□□□ -0.92
HPS4-217ENST00000496385 SEL1LQ9UBV2 794 aa9.33□□□□□ -0.92
HPS4-217ENST00000496385 GIPC1O14908 333 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 GCATO75600 419 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 KRT37O76014 449 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 PROSCO94903 275 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 KRT6CP48668 564 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 TUBA1BP68363 451 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 NSUN2Q08J23 767 aaKnown RBP eCLIP9.32□□□□□ -0.92
HPS4-217ENST00000496385 CHI3L2Q15782 390 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 DGKDQ16760 1214 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 ABCB5Q2M3G0 1257 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 TCHHL1Q5QJ38 904 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 MOXD1Q6UVY6 613 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 C16orf86Q6ZW13 317 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 TUBA1AQ71U36 451 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 CPNE8Q86YQ8 564 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 RCOR2Q8IZ40 523 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 GALNT4Q8N4A0 578 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 HIPK4Q8NE63 616 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 NKD2Q969F2 451 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 FRMD8Q9BZ67 464 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 FRMD8P1Q9BZ68 369 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 GLT8D2Q9H1C3 349 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 C12orf65Q9H3J6 166 aaKnown RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 CAAP1Q9H8G2 361 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 PARVGQ9HBI0 331 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 PNPLA8Q9NP80 782 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 MTMR7Q9Y216 660 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 EMSYQ7Z589 1322 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 ZNF839A8K0R7 811 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 NOTOA8MTQ0 251 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 XPO1O14980 1071 aaKnown RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 IDH3BO43837 385 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 NOL3O60936 208 aaKnown RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 SGPL1O95470 568 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 TSPY3P0CV98 308 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 TSPY8P0CW00 308 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 SSTR1P30872 391 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 CLK2P49760 499 aaKnown RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 GALNT2Q10471 571 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 CYP2A13Q16696 494 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 FAM209AQ5JX71 171 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 FAAH2Q6GMR7 532 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 NEK10Q6ZWH5 1172 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 BPHLQ86WA6 291 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 RASAL3Q86YV0 1011 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 ZNF444Q8N0Y2 327 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 TMEM102Q8N9M5 508 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 LILRB4Q8NHJ6 448 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 GJA10Q969M2 543 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 KLF6Q99612 283 aaPredicted RBP9.32□□□□□ -0.92
HPS4-217ENST00000496385 ACP6Q9NPH0 428 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 HACD3Q9P035 362 aa9.32□□□□□ -0.92
HPS4-217ENST00000496385 ZNF112Q9UJU3 913 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms