RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 STARD13Q9Y3M8 1113 aa11.42□□□□□ -0.58
RNF220-217ENST00000496262 CNOT1A5YKK6 2376 aaKnown RBP11.42□□□□□ -0.58
RNF220-217ENST00000496262 NUP205Q92621 2012 aa11.42□□□□□ -0.58
RNF220-217ENST00000496262 MYH10P35580 1976 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CCDC66A2RUB6 948 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 C1QTNF9BB2RNN3 333 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 BIN1O00499 593 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 STX10O60499 249 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 ZNF217O75362 1048 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CISD3P0C7P0 127 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 C1QTNF9P0C862 333 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CEACAM1P13688 526 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CD19P15391 556 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 H2AFXP16104 143 aaPredicted RBP11.41□□□□□ -0.58
RNF220-217ENST00000496262 CSRP1P21291 193 aaKnown RBP11.41□□□□□ -0.58
RNF220-217ENST00000496262 GTF2H1P32780 548 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 DPP6P42658 865 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 SLC8A3P57103 927 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 YWHAGP61981 247 aaKnown RBP eCLIP11.41□□□□□ -0.58
RNF220-217ENST00000496262 COG7P83436 770 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 MYL5Q02045 173 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 STARD3Q14849 445 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 NCAPHQ15003 741 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 GEN1Q17RS7 908 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 DUOXA1Q1HG43 343 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CBWD6Q4V339 395 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CBWD3Q5JTY5 395 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 SPDYCQ5MJ68 293 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CBWD5Q5RIA9 395 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 FYB2Q5VWT5 728 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 SLC23A3Q6PIS1 610 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 SLC41A1Q8IVJ1 513 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 RGL4Q8IZJ4 473 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CCDC34Q96HJ3 373 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 MRGPRX1Q96LB2 322 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CDK5RAP1Q96SZ6 601 aaKnown RBP11.41□□□□□ -0.58
RNF220-217ENST00000496262 TSG101Q99816 390 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 SRRTQ9BXP5 876 aaKnown RBP11.41□□□□□ -0.58
RNF220-217ENST00000496262 ARGLU1Q9NWB6 273 aaPredicted RBP11.41□□□□□ -0.58
RNF220-217ENST00000496262 CLIC5Q9NZA1 410 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 AGO1Q9UL18 857 aaKnown RBP11.41□□□□□ -0.58
RNF220-217ENST00000496262 STRIP2Q9ULQ0 834 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 SLC6A14Q9UN76 642 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 USP3Q9Y6I4 520 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 STON1Q9Y6Q2 735 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
RNF220-217ENST00000496262 USP24Q9UPU5 2620 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 SPAARA0A1B0GVQ0 90 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TRIM49BA6NDI0 452 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TULP2O00295 520 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TSPAN3O60637 253 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 CYBBP04839 570 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TPM1P09493 284 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 MAOBP27338 520 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 CHKAP35790 457 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 IL12RB1P42701 662 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 PRCPP42785 496 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 MFAP3P55082 362 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 ENPEPQ07075 957 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 ADIGQ0VDE8 80 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TERF2Q15554 542 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 FUT11Q495W5 492 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 UNQ6494/PRO21346Q6UXR6 183 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 ANKS1BQ7Z6G8 1248 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 ARHGAP18Q8N392 663 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 HDDC3Q8N4P3 179 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TTC39CQ8N584 583 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 MINDY1Q8N5J2 469 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 MNS1Q8NEH6 495 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 CEP76Q8TAP6 659 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 UBA3Q8TBC4 463 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 DDI1Q8WTU0 396 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 SORCS1Q8WY21 1168 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 EDEM1Q92611 657 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 ULBP1Q9BZM6 244 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 DCLK3Q9C098 648 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 CIPCQ9C0C6 399 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 SLC32A1Q9H598 525 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 CD248Q9HCU0 757 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 RMND1Q9NWS8 449 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 TSPAN16Q9UKR8 245 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 CLEC4EQ9ULY5 219 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 ZNF510Q9Y2H8 683 aa11.4□□□□□ -0.58
RNF220-217ENST00000496262 MEI4A8MW99 385 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 PIK3R2O00459 728 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 ZSCAN12O43309 604 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 SYNCRIPO60506 623 aaKnown RBP11.39□□□□□ -0.59
RNF220-217ENST00000496262 OPHN1O60890 802 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 ZBED1O96006 694 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 PENKP01210 267 aaPredicted RBP11.39□□□□□ -0.59
RNF220-217ENST00000496262 SERPINF2P08697 491 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 LCP1P13796 627 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 HOXD12P35452 270 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 PMS1P54277 932 aaKnown RBP11.39□□□□□ -0.59
RNF220-217ENST00000496262 ETF1P62495 437 aaKnown RBP11.39□□□□□ -0.59
RNF220-217ENST00000496262 SIM1P81133 766 aaPredicted RBP11.39□□□□□ -0.59
RNF220-217ENST00000496262 ARID5AQ03989 594 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 PDE4CQ08493 712 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 CUL2Q13617 745 aa11.39□□□□□ -0.59
RNF220-217ENST00000496262 PLEKHG6Q3KR16 790 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms