RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 UGT1A5P35504 534 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 EHHADHQ08426 723 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 CAMK2GQ13555 558 aaPredicted RBP9.39□□□□□ -0.91
GARNL3-219ENST00000495172 TMEM132DQ14C87 1099 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 CALCRLQ16602 461 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 CFAP221Q4G0U5 840 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF542PQ5EBM4 170 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 RBM44Q6ZP01 1051 aaKnown RBP9.39□□□□□ -0.91
GARNL3-219ENST00000495172 EFL1Q7Z2Z2 1120 aaKnown RBP9.39□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF276Q8N554 614 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 KIAA1958Q8N8K9 716 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 BRF1Q92994 677 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 SPATA17Q96L03 361 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 MYOCQ99972 504 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
GARNL3-219ENST00000495172 FOXP3Q9BZS1 431 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 BHMT2Q9H2M3 363 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 EPB41L5Q9HCM4 733 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 CRTAC1Q9NQ79 661 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 ELOVL2Q9NXB9 296 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 DPP3Q9NY33 737 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 VPS4AQ9UN37 437 aa9.39□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF469Q96JG9 3925 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-219ENST00000495172 MAP1AP78559 2803 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-219ENST00000495172 CCDC187A0A096LP49 1063 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 PRAMEF33A0A0G2JMD5 474 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 MDM4O15151 490 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 PRAMEF10O60809 474 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 DNTTP04053 509 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 LIPCP11150 499 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 PFKLP17858 780 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 MAT2AP31153 395 aaKnown RBP9.38□□□□□ -0.91
GARNL3-219ENST00000495172 ETV5P41161 510 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 WNT7BP56706 349 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 CYP27A1Q02318 531 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 NUCB1Q02818 461 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 SSRP1Q08945 709 aaKnown RBP9.38□□□□□ -0.91
GARNL3-219ENST00000495172 RAD51AP2Q09MP3 1159 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 MAPK7Q13164 816 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 HDAC1Q13547 482 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-219ENST00000495172 TTC22Q5TAA0 569 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 Q6ZUG5 572 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 SV2AQ7L0J3 742 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 ZSCAN1Q8NBB4 408 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 SCAMP5Q8TAC9 235 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 KIFAP3Q92845 792 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 GTF3C6Q969F1 213 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 SKA1Q96BD8 255 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 ACBD6Q9BR61 282 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 RUSC1Q9BVN2 902 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 NEUROG2Q9H2A3 272 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 TMEM60Q9H2L4 133 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 TMEM245Q9H330 911 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 ERVMER34-1Q9H9K5 563 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 SGK2Q9HBY8 427 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 PRSS16Q9NQE7 514 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 FBXL12Q9NXK8 326 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 MARK1Q9P0L2 795 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 WDR35Q9P2L0 1181 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 PISDQ9UG56 409 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 ERRFI1Q9UJM3 462 aaPredicted RBP9.38□□□□□ -0.91
GARNL3-219ENST00000495172 FBXO10Q9UK96 956 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 TP53TG5Q9Y2B4 290 aa9.38□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF106Q9H2Y7 1883 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 CCDC196A0A1B0GTZ2 297 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 A0A1W2PP55 124 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 TISP43B9A030 160 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 PLD2O14939 933 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 XPOTO43592 962 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 IGHDP01880 384 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 PDGFRBP09619 1106 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 IFNAR1P17181 557 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 MAGEA11P43364 429 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 NR5A1Q13285 461 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 FNDC3BQ53EP0 1204 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 HEATR4Q86WZ0 1026 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 ZC3H3Q8IXZ2 948 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 FBXO39Q8N4B4 442 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 PIWIL1Q96J94 861 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 PREBQ9HCU5 417 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 TUFT1Q9NNX1 390 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 MAGEC2Q9UBF1 373 aaPredicted RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 NUDT5Q9UKK9 219 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 NME7Q9Y5B8 376 aa9.37□□□□□ -0.91
GARNL3-219ENST00000495172 TNRC6AQ8NDV7 1962 aaKnown RBP9.37□□□□□ -0.91
GARNL3-219ENST00000495172 MYH11P35749 1972 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.36□□□□□ -0.91
GARNL3-219ENST00000495172 K7ESM1 405 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 CLDN5O00501 218 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 MID1O15344 667 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 LDLRP01130 860 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 GP1BAP07359 652 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 ADRB2P07550 413 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 PRKAR1AP10644 381 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 ANXA13P27216 316 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 POLR2BP30876 1174 aaKnown RBP9.36□□□□□ -0.91
GARNL3-219ENST00000495172 ACOT2P49753 483 aa9.36□□□□□ -0.91
GARNL3-219ENST00000495172 SRSF11Q05519 484 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms