RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CADM4Q8NFZ8 388 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 OR2I1PQ8NGU4 316 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 RNF139Q8WU17 664 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 KCTD13Q8WZ19 329 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 DNASE2BQ8WZ79 361 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 PRCCQ92733 491 aaPredicted RBP24.28■■□□□ 1.48
COL27A1-208ENST00000494780 GATA6Q92908 595 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 GTPBP4Q9BZE4 634 aaKnown RBP24.28■■□□□ 1.48
COL27A1-208ENST00000494780 CIPCQ9C0C6 399 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 ARMCX3Q9UH62 379 aaPredicted RBP24.28■■□□□ 1.48
COL27A1-208ENST00000494780 ZMIZ1Q9ULJ6 1067 aa24.28■■□□□ 1.48
COL27A1-208ENST00000494780 CHD6Q8TD26 2715 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 MEI4A8MW99 385 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 H0Y626 953 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 SMC2O95347 1197 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 TRIM16O95361 564 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 SETSIPP0DME0 302 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 NCAM1P13591 858 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 TBXAS1P24557 533 aaPredicted RBP24.27■■□□□ 1.48
COL27A1-208ENST00000494780 MAOBP27338 520 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 RDXP35241 583 aaKnown RBP24.27■■□□□ 1.48
COL27A1-208ENST00000494780 TPMTP51580 245 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 LRRC63Q05C16 580 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 ADIGQ0VDE8 80 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 BSPRYQ5W0U4 402 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 SIX6OS1Q8N1H7 587 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 SCML4Q8N228 414 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 UBR7Q8N806 425 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 SLC35C1Q96A29 364 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 GPR174Q9BXC1 333 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 ZDHHC5Q9C0B5 715 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 ABCC13Q9NSE7 274 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 STOML2Q9UJZ1 356 aa24.27■■□□□ 1.48
COL27A1-208ENST00000494780 A0A1B0GTW7 788 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 KCNJ18B7U540 433 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 O00370 1275 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 HYAL3O43820 417 aaPredicted RBP24.26■■□□□ 1.47
COL27A1-208ENST00000494780 GJB3O75712 270 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 LATS1O95835 1130 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 IGLV3-19P01714 112 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 EPHX1P07099 455 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 PRKCHP24723 683 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 HOXD9P28356 352 aaPredicted RBP24.26■■□□□ 1.47
COL27A1-208ENST00000494780 COPAP53621 1224 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 PMS1P54277 932 aaKnown RBP24.26■■□□□ 1.47
COL27A1-208ENST00000494780 ARID5AQ03989 594 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 TMEM215Q68D42 235 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 SERPINA13PQ6UXR4 307 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 SPATA20Q8TB22 786 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 UBA3Q8TBC4 463 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 EDEM1Q92611 657 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 CNGB3Q9NQW8 809 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 SFMBT1Q9UHJ3 866 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 ZFHX4Q86UP3 3567 aa24.26■■□□□ 1.47
COL27A1-208ENST00000494780 YJEFN3A6XGL0 299 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 E7ENQ6 273 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 ACADMP11310 421 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 LRMPQ12912 555 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 PKDCCQ504Y2 493 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 WFIKKN2Q8TEU8 576 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 SORCS1Q8WY21 1168 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 NUP58Q9BVL2 599 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 METTL14Q9HCE5 456 aaKnown RBP24.25■■□□□ 1.47
COL27A1-208ENST00000494780 MSRB2Q9Y3D2 182 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 IGF2RP11717 2491 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 CKAP5Q14008 2032 aa24.25■■□□□ 1.47
COL27A1-208ENST00000494780 GOLGA6L4A6NEF3 574 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 METTL12A8MUP2 240 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 TSPAN3O60637 253 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 PAEPP09466 180 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 DAOAP59103 153 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 FAM193AP78312 1265 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 GRIK2Q13002 908 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 ADGRF1Q5T601 910 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 LCLAT1Q6UWP7 414 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 ENGASEQ8NFI3 743 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 OR2T3Q8NH03 318 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 SMARCE1Q969G3 411 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 TMA16Q96EY4 203 aaKnown RBP24.24■■□□□ 1.47
COL27A1-208ENST00000494780 FRYQ5TBA9 3013 aa24.24■■□□□ 1.47
COL27A1-208ENST00000494780 TRIM49BA6NDI0 452 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 HLA-FP30511 346 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 FMO5P49326 533 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 CAMK2GQ13555 558 aaPredicted RBP24.23■■□□□ 1.47
COL27A1-208ENST00000494780 ZNF423Q2M1K9 1284 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 DCAF12L1Q5VU92 463 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 ZCCHC9Q8N567 271 aaKnown RBP24.23■■□□□ 1.47
COL27A1-208ENST00000494780 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.23■■□□□ 1.47
COL27A1-208ENST00000494780 IRX2Q9BZI1 471 aaPredicted RBP24.23■■□□□ 1.47
COL27A1-208ENST00000494780 HOOK1Q9UJC3 728 aaKnown RBP24.23■■□□□ 1.47
COL27A1-208ENST00000494780 KLK13Q9UKR3 277 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 PLA2G4CQ9UP65 541 aa24.23■■□□□ 1.47
COL27A1-208ENST00000494780 PMM2O15305 246 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 SH3BP5O60239 455 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 LCP1P13796 627 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 MSANTD2Q6P1R3 559 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 TMEM270Q6UE05 265 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 KIAA0907Q7Z7F0 614 aaPredicted RBP24.22■■□□□ 1.47
COL27A1-208ENST00000494780 SLC35F5Q8WV83 523 aa24.22■■□□□ 1.47
COL27A1-208ENST00000494780 IRGQQ8WZA9 623 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms