RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 FAM90A5PA8MXJ8 464 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 FAM90A15PP0C7V4 464 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 FAM90A14PP0C7W9 464 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 ITGB6P18564 788 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 GPD1P21695 349 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 GALNSP34059 522 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 THBS4P35443 961 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 IGHMBP2P38935 993 aaKnown RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 CLK3P49761 638 aaKnown RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 SOX10P56693 466 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 GPC5P78333 572 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 HOXA4Q00056 320 aaPredicted RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 RNASELQ05823 741 aaKnown RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 SF3A3Q12874 501 aaKnown RBP eCLIP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 ADCK5Q3MIX3 580 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 TRIM60Q495X7 471 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 SERPINA13PQ6UXR4 307 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 RINLQ6ZS11 566 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 MOGAT3Q86VF5 341 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 OR6Y1Q8NGX8 325 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 DAZAP1Q96EP5 407 aaKnown RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 UROC1Q96N76 676 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 SNX18Q96RF0 628 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 PAAF1Q9BRP4 392 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 THAP7Q9BT49 309 aaPredicted RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 DDX23Q9BUQ8 820 aaKnown RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 RXFP3Q9NSD7 469 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 LIN7CQ9NUP9 197 aaKnown RBP3.14□□□□□ -1.91
LRIF1-203ENST00000494675 SH3BP4Q9P0V3 963 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 GPR52Q9Y2T5 361 aa3.14□□□□□ -1.91
LRIF1-203ENST00000494675 M0QZQ0 153 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 ZNF213O14771 459 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 PRAMEF2O60811 474 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 GCATO75600 419 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 KRT38O76015 456 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 JTBO76095 146 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 MT-CO3P00414 261 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 SLC3A2P08195 630 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 ITPKBP27987 946 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 AARSP49588 968 aaKnown RBP eCLIP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 JAK3P52333 1124 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 PRKAA2P54646 552 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 RAE1P78406 368 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 CFHR3Q02985 330 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 CUL4BQ13620 913 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 COLEC12Q5KU26 742 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TMEM63BQ5T3F8 832 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 ACSM6Q6P461 480 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TMEM65Q6PI78 240 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TRIM72Q6ZMU5 477 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 BCDIN3DQ7Z5W3 292 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 AMIGO2Q86SJ2 522 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 SUGP1Q8IWZ8 645 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 BOLLQ8N9W6 283 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 MAFAQ8NHW3 353 aaPredicted RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 CSGALNACT1Q8TDX6 532 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 AFG1LQ8WV93 481 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 GOLGA1Q92805 767 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 GCC1Q96CN9 775 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TIMP4Q99727 224 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 MECRQ9BV79 373 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 KLK15Q9H2R5 256 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 BAG5Q9UL15 447 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 ZBTB1Q9Y2K1 713 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3DA0A087WVF3 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3IA0A087WXS9 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3EA0A087X179 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3KA0A087X1G2 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 LOC105369274A0A096LPK9 316 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 LOC102723532A0A0G2JNH3 316 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 GXYLT2A0PJZ3 443 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3BA6NDS4 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3FA6NER0 549 aaPredicted RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TTC34A8MYJ7 566 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TARM1B6A8C7 271 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3LB9A6J9 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 H0Y3Z8 333 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 M0QYT0 321 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 CLIC1O00299 241 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 FYB1O15117 783 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 FAM155BO75949 473 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3HP0C7X1 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 APEHP13798 732 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 WT1P19544 449 aaPredicted RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 MATN1P21941 496 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 SERPINA4P29622 427 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 ADD2P35612 726 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 MAPK9P45984 424 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 WDR5P61964 334 aaKnown RBP3.13□□□□□ -1.91
LRIF1-203ENST00000494675 MFSD13AQ14CX5 517 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TAF12Q16514 161 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 AAK1Q2M2I8 961 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TTC22Q5TAA0 569 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3GQ6DHY5 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 TBC1D3CQ6IPX1 549 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 C16orf89Q6UX73 402 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 ARHGEF25Q86VW2 580 aa3.13□□□□□ -1.91
LRIF1-203ENST00000494675 C2CD5Q86YS7 1000 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms