RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 RPP40O75818 363 aaKnown RBP6.53□□□□□ -1.36
MSL3-217ENST00000494268 SFPQP23246 707 aaKnown RBP eCLIP6.53□□□□□ -1.36
MSL3-217ENST00000494268 VPS41P49754 854 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 YPEL5P62699 121 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 ICA1Q05084 483 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 ZNF268Q14587 947 aaPredicted RBP6.53□□□□□ -1.36
MSL3-217ENST00000494268 DAZAP2Q15038 168 aaPredicted RBP6.53□□□□□ -1.36
MSL3-217ENST00000494268 SRSF7Q16629 238 aaKnown RBP eCLIP6.53□□□□□ -1.36
MSL3-217ENST00000494268 PFKFB3Q16875 520 aaPredicted RBP6.53□□□□□ -1.36
MSL3-217ENST00000494268 CCDC174Q6PII3 467 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 TFAP2DQ7Z6R9 452 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 GATAD2AQ86YP4 633 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 NRSN1Q8IZ57 195 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 OSR1Q8TAX0 266 aaPredicted RBP6.53□□□□□ -1.36
MSL3-217ENST00000494268 MAP4K1Q92918 833 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 POLR3GLQ9BT43 218 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 CDCP1Q9H5V8 836 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 AGO4Q9HCK5 861 aaKnown RBP6.53□□□□□ -1.36
MSL3-217ENST00000494268 ASNSD1Q9NWL6 643 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 LRFN1Q9P244 771 aa6.53□□□□□ -1.36
MSL3-217ENST00000494268 PCSK5Q92824 1860 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 LOC105369274A0A096LPK9 316 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 LOC102723532A0A0G2JNH3 316 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 KIF28PB7ZC32 967 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 KELP23276 732 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 SERPINF1P36955 418 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 BTBD16Q32M84 506 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 MEX3CQ5U5Q3 659 aaKnown RBP6.52□□□□□ -1.37
MSL3-217ENST00000494268 KIAA1614Q5VZ46 1190 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 SLC2A7Q6PXP3 512 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 NEK8Q86SG6 692 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 CNGA4Q8IV77 575 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 OR4N4Q8N0Y3 316 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 WDR60Q8WVS4 1066 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 GLMPQ8WWB7 406 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 MECRQ9BV79 373 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 KATNAL1Q9BW62 490 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 TM2D2Q9BX73 214 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 SEMA4CQ9C0C4 833 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 MLXIPLQ9NP71 852 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 ARL8BQ9NVJ2 186 aa6.52□□□□□ -1.37
MSL3-217ENST00000494268 SYT5O00445 386 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 TP73O15350 636 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 KAT7O95251 611 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 CSTBP04080 98 aaKnown RBP6.51□□□□□ -1.37
MSL3-217ENST00000494268 MATN1P21941 496 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 ATP5F1P24539 256 aaPredicted RBP6.51□□□□□ -1.37
MSL3-217ENST00000494268 NDUFS1P28331 727 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 THBS4P35443 961 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 HOXD12P35452 270 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 IDUAP35475 653 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 STAT6P42226 847 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 CCDC38Q502W7 563 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 MTX3Q5HYI7 312 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 ZNF626Q68DY1 528 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 ANKRD40Q6AI12 368 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 LIN54Q6MZP7 749 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 TRABD2AQ86V40 505 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 EID2BQ96D98 161 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 RMDN3Q96TC7 470 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 ARPC5LQ9BPX5 153 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 KCNK9Q9NPC2 374 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 DACT1Q9NYF0 836 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 UBE2J1Q9Y385 318 aaPredicted RBP6.51□□□□□ -1.37
MSL3-217ENST00000494268 COMMD10Q9Y6G5 202 aa6.51□□□□□ -1.37
MSL3-217ENST00000494268 COL3A1P02461 1466 aaPredicted RBP6.51□□□□□ -1.37
MSL3-217ENST00000494268 WDR91A4D1P6 747 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 FAM90A18PA6NE21 464 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 FAM90A16PA6NEW6 464 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 DNAJC9-AS1A6NH13 148 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 FAM90A9PA6NNJ1 464 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 FAM90A5PA8MXJ8 464 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 TTC34A8MYJ7 566 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 KCNU1A8MYU2 1149 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 ACKR2O00590 384 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 FAM90A15PP0C7V4 464 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 FAM90A14PP0C7W9 464 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 ZNF84P51523 738 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 PNLIPRP1P54315 467 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 AAK1Q2M2I8 961 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 ENAHQ8N8S7 591 aaPredicted RBP6.5□□□□□ -1.37
MSL3-217ENST00000494268 SCAMP5Q8TAC9 235 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 CELF1Q92879 486 aaKnown RBP6.5□□□□□ -1.37
MSL3-217ENST00000494268 VOPP1Q96AW1 172 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 TRMT61AQ96FX7 289 aaKnown RBP6.5□□□□□ -1.37
MSL3-217ENST00000494268 GATA5Q9BWX5 397 aaPredicted RBP6.5□□□□□ -1.37
MSL3-217ENST00000494268 CCDC134Q9H6E4 229 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 MLXIPQ9HAP2 919 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 B3GNT3Q9Y2A9 372 aa6.5□□□□□ -1.37
MSL3-217ENST00000494268 CYP2D7A0A087X1C5 515 aa6.49□□□□□ -1.37
MSL3-217ENST00000494268 DSCR3O14972 297 aa6.49□□□□□ -1.37
MSL3-217ENST00000494268 PPP6R2O75170 966 aa6.49□□□□□ -1.37
MSL3-217ENST00000494268 RNF8O76064 485 aa6.49□□□□□ -1.37
MSL3-217ENST00000494268 SLC3A2P08195 630 aaKnown RBP6.49□□□□□ -1.37
MSL3-217ENST00000494268 TRAPPC10P48553 1259 aa6.49□□□□□ -1.37
MSL3-217ENST00000494268 FAM3BP58499 235 aaPredicted RBP6.49□□□□□ -1.37
MSL3-217ENST00000494268 SSBP2P81877 361 aaPredicted RBP6.49□□□□□ -1.37
MSL3-217ENST00000494268 CBFBQ13951 182 aa6.49□□□□□ -1.37
MSL3-217ENST00000494268 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
MSL3-217ENST00000494268 FAM110CQ1W6H9 321 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms