RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.65
CLCN6-208ENST00000494028 CHMP2BQ9UQN3 213 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 TRIM17Q9Y577 477 aa11.02□□□□□ -0.65
CLCN6-208ENST00000494028 PTPRSQ13332 1948 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 C5orf60A6NFR6 353 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FOXO6A8MYZ6 492 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 E7EVH7 732 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FAM72CH0Y354 149 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 PITPNM1O00562 1244 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 TNFRSF10BO14763 440 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 GCATO75600 419 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 METTL18O95568 372 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 COL6A1P12109 1028 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 CREB1P16220 341 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 ADRA1BP35368 520 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 MAGEA3P43357 314 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 CXCR3P49682 368 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 SEC24CP53992 1094 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 TPI1P60174 286 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 MTM1Q13496 603 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 BFSP2Q13515 415 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 SEMA5AQ13591 1074 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 ARHGEF6Q15052 776 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 RASA2Q15283 850 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FAM72AQ5TYM5 149 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 HEATR6Q6AI08 1181 aaKnown RBP11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FAM72DQ6L9T8 149 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 C4orf22Q6V702 233 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 NLRP14Q86W24 1093 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FAM72BQ86X60 149 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 SPATA2LQ8IUW3 424 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-208ENST00000494028 PDIK1LQ8N165 341 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 NPWQ8N729 165 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 DBF4BQ8NFT6 615 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 MAML1Q92585 1016 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 DHRS4Q9BTZ2 278 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 TRIM62Q9BVG3 475 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 SEZ6LQ9BYH1 1024 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FRMD8Q9BZ67 464 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-208ENST00000494028 SMOC2Q9H3U7 446 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 CCDC134Q9H6E4 229 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 ACSS3Q9H6R3 686 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 PPCSQ9HAB8 311 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
CLCN6-208ENST00000494028 HCSTQ9UBK5 93 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FETUBQ9UGM5 382 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 FBXW11Q9UKB1 542 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 TTLL3Q9Y4R7 772 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 SNX10Q9Y5X0 201 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 ACTL7BQ9Y614 415 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 TEX264Q9Y6I9 313 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 DOCK4Q8N1I0 1966 aa11.01□□□□□ -0.65
CLCN6-208ENST00000494028 TMEM120BA0PK00 339 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 RNF103O00237 685 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 NDUFAB1O14561 156 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SYN3O14994 580 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 CREB3O43889 395 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 OAZ2O95190 189 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 FAM107AO95990 144 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 ERCC2P18074 760 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SSTR1P30872 391 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 PHBP35232 272 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 ELK3P41970 407 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 CCT5P48643 541 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SLC11A1P49279 550 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 YWHAGP61981 247 aaKnown RBP eCLIP11□□□□□ -0.65
CLCN6-208ENST00000494028 EIF4EBP2Q13542 120 aaPredicted RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 KLHL38Q2WGJ6 581 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SLC39A12Q504Y0 691 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 VARS2Q5ST30 1063 aaKnown RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 SYCP2LQ5T4T6 812 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 BSPRYQ5W0U4 402 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SCD5Q86SK9 330 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 TADA2BQ86TJ2 420 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 TRABD2AQ86V40 505 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 IGDCC3Q8IVU1 814 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 VPS52Q8N1B4 723 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 NETO2Q8NC67 525 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 MCUQ8NE86 351 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SCAMP5Q8TAC9 235 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 PYROXD1Q8WU10 500 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 TFB1MQ8WVM0 346 aaKnown RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 HTR3CQ8WXA8 447 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 SEPT8Q92599 483 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 FUBP3Q96I24 572 aaKnown RBP eCLIP11□□□□□ -0.65
CLCN6-208ENST00000494028 CASD1Q96PB1 797 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 CCDC77Q9BR77 488 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 PLAC1Q9HBJ0 212 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 PPANQ9NQ55 473 aaKnown RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 EIF2B3Q9NR50 452 aaKnown RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 ABI2Q9NYB9 513 aaPredicted RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 KANSL3Q9P2N6 904 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 PSMC3IPQ9P2W1 217 aaPredicted RBP11□□□□□ -0.65
CLCN6-208ENST00000494028 SLC24A2Q9UI40 661 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 PLXNA4Q9HCM2 1894 aa11□□□□□ -0.65
CLCN6-208ENST00000494028 POC1B-GALNT4F8VUJ3 575 aa10.99□□□□□ -0.65
CLCN6-208ENST00000494028 PPP1R12AO14974 1030 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms