RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 GLB1LQ6UWU2 654 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 RRAGAQ7L523 313 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 OTOP2Q7RTS6 562 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 TMCO2Q7Z6W1 182 aaPredicted RBP7□□□□□ -1.29
TRA2B-216ENST00000493864 ZNF280BQ86YH2 543 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 USP33Q8TEY7 942 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 FAM168AQ92567 244 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 RABGGTAQ92696 567 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 PTPRN2Q92932 1015 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 KAT5Q92993 513 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 CASD1Q96PB1 797 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 NUP58Q9BVL2 599 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 TTYH3Q9C0H2 523 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 XYLT2Q9H1B5 865 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 APOBEC3GQ9HC16 384 aaKnown RBP7□□□□□ -1.29
TRA2B-216ENST00000493864 NLRC4Q9NPP4 1024 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 GPR27Q9NS67 375 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 MARCH2Q9P0N8 246 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 NDOR1Q9UHB4 597 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 DNAJC12Q9UKB3 198 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 ITGA11Q9UKX5 1188 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 CAPN11Q9UMQ6 739 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 UBQLN1Q9UMX0 589 aaKnown RBP7□□□□□ -1.29
TRA2B-216ENST00000493864 LUC7L2Q9Y383 392 aaKnown RBP7□□□□□ -1.29
TRA2B-216ENST00000493864 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
TRA2B-216ENST00000493864 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7□□□□□ -1.29
TRA2B-216ENST00000493864 EYSQ5T1H1 3165 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 TBKBP1A7MCY6 615 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 AKR1B15C9JRZ8 316 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 FOXN3O00409 490 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PIRO00625 290 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PPP1R12AO14974 1030 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 XPOTO43592 962 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 ASS1P00966 412 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 FUCA1P04066 466 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 GLI1P08151 1106 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PFKMP08237 780 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 UCHL3P15374 230 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PNLIPP16233 465 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 JUNBP17275 347 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 TRIM21P19474 475 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 SDHBP21912 280 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 LRPAP1P30533 357 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 KRT9P35527 623 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 ARL4AP40617 200 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 WDR5P61964 334 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 GABREP78334 506 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 DRAP1Q14919 205 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 ARHGAP44Q17R89 818 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 ZNF699Q32M78 642 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 FIGNQ5HY92 759 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 BICRALQ6AI39 1079 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 SDE2Q6IQ49 451 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 RSPO2Q6UXX9 243 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PPM1KQ8N3J5 372 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 LZTR1Q8N653 840 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 TC2NQ8N9U0 490 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 URGCPQ8TCY9 931 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 TAF4BQ92750 862 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 TOP1MTQ969P6 601 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 HPDLQ96IR7 371 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 NT5C1BQ96P26 610 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 LBHD1Q9BQE6 289 aaPredicted RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 PAAF1Q9BRP4 392 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 NAA15Q9BXJ9 866 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 STK33Q9BYT3 514 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 EDEM3Q9BZQ6 932 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 CRTAC1Q9NQ79 661 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 SLC38A7Q9NVC3 462 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 TBC1D13Q9NVG8 400 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 CEP72Q9P209 647 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 FBXL7Q9UJT9 491 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 YBX2Q9Y2T7 364 aaKnown RBP6.99□□□□□ -1.29
TRA2B-216ENST00000493864 SCN1AP35498 2009 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 MICAL3Q7RTP6 2002 aa6.99□□□□□ -1.29
TRA2B-216ENST00000493864 REV3LO60673 3130 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 PDCD11Q14690 1871 aaKnown RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CASTOR2A6NHX0 329 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 F8W810 466 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 EFCAB14O75071 495 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 MFAP3LO75121 409 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ZC3H11AO75152 810 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 DGKIO75912 1065 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CLSTN1O94985 981 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 AMHP03971 560 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 WEE2P0C1S8 567 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 PNMA6AP0CW24 399 aaPredicted RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ACO1P21399 889 aaKnown RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ATICP31939 592 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 RPL9P32969 192 aaKnown RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CLCNKBP51801 687 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 MFAP3P55082 362 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 CDH8P55286 799 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 NOP14P78316 857 aaKnown RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 ZBED6P86452 979 aa6.98□□□□□ -1.29
TRA2B-216ENST00000493864 RNASELQ05823 741 aaKnown RBP6.98□□□□□ -1.29
TRA2B-216ENST00000493864 DSC1Q08554 894 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms