RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 DGKKQ5KSL6 1271 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 RABGAP1LQ5R372 815 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 ADGRF1Q5T601 910 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 SYPL2Q5VXT5 272 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 ALKBH5Q6P6C2 394 aaKnown RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 LRRC31Q6UY01 552 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 MON1BQ7L1V2 547 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 ARCQ7LC44 396 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 BHLHA9Q7RTU4 235 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 BMP8AQ7Z5Y6 402 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 CHSY1Q86X52 802 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 ADGRG2Q8IZP9 1017 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 CTNNBL1Q8WYA6 563 aaPredicted RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 BHMTQ93088 406 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 TMA16Q96EY4 203 aaKnown RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 ASIC4Q96FT7 647 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 BTN2A3PQ96KV6 586 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 MCEEQ96PE7 176 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 PNKPQ96T60 521 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 DNAJC7Q99615 494 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 DDX23Q9BUQ8 820 aaKnown RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 OSBPL6Q9BZF3 934 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 LTB4R2Q9NPC1 389 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 HPS4Q9NQG7 708 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 DEC1Q9P2X7 70 aa8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 CNOT8Q9UFF9 292 aaKnown RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 AGO1Q9UL18 857 aaKnown RBP8.45□□□□□ -1.06
TM4SF1-204ENST00000493348 SSU72P8A0A1W2PR75 194 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 KRBA1A5PL33 1030 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 TBC1D3BA6NDS4 549 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 SIGLEC16A6NMB1 481 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 KCNU1A8MYU2 1149 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 DDX3XO00571 662 aaKnown RBP eCLIP8.44□□□□□ -1.061e-13■□□□□ 11.3
TM4SF1-204ENST00000493348 ZBTB24O43167 697 aaPredicted RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 TSPAN3O60637 253 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 ATG13O75143 517 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 MOCS3O95396 460 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 TYRP14679 529 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 AOC1P19801 751 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 CD72P21854 359 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 PSMA2P25787 234 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 CDC25BP30305 580 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 HNRNPH3P31942 346 aaKnown RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 EIF2DP41214 584 aaKnown RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 DGKGP49619 791 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 GSCP56915 257 aaPredicted RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 ZXDBP98169 803 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 KDSRQ06136 332 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 SLC18A3Q16572 532 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 FBXO43Q4G163 708 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 BRMS1LQ5PSV4 323 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 GRAMD4Q6IC98 578 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 SCYL2Q6P3W7 929 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 RHBDF2Q6PJF5 856 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 Q6ZNB5 142 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 TXLNBQ8N3L3 684 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 SYNPOQ8N3V7 929 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 CPXM2Q8N436 756 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 EMC1Q8N766 993 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 NAT16Q8N8M0 369 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 SPC24Q8NBT2 197 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 HJURPQ8NCD3 748 aaPredicted RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 PJA1Q8NG27 643 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 UCMAQ8WVF2 138 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 RXFP2Q8WXD0 754 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 AZIN2Q96A70 460 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 PIWIL1Q96J94 861 aaKnown RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 CFAP57Q96MR6 1250 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 PPP1R9BQ96SB3 815 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 TBCBQ99426 244 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 PRRX2Q99811 253 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 NCAPGQ9BPX3 1015 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 IRX2Q9BZI1 471 aaPredicted RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 FOXQ1Q9C009 403 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 NHEJ1Q9H9Q4 299 aaPredicted RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 LMAN1LQ9HAT1 526 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 ARHGEF4Q9NR80 690 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 DNAJC17Q9NVM6 304 aaKnown RBP8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 IMPACTQ9P2X3 320 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 LCMT1Q9UIC8 334 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
TM4SF1-204ENST00000493348 H0Y626 953 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 ARNTLO00327 626 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 TRDMT1O14717 391 aaKnown RBP8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 HOXC11O43248 304 aaPredicted RBP8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 TBL1XO60907 577 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 FYNP06241 537 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 PLEKP08567 350 aaPredicted RBP8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 H2AFZP0C0S5 128 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 TACR2P21452 398 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 RRM1P23921 792 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 TIE1P35590 1138 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 FLT3P36888 993 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 GRIA2P42262 883 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 SSR1P43307 286 aaKnown RBP8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 PTPN9P43378 593 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 GALK1P51570 392 aa8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 VCPP55072 806 aaKnown RBP8.43□□□□□ -1.06
TM4SF1-204ENST00000493348 GSDMDP57764 484 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms