RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CDH8P55286 799 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 MYL6P60660 151 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 CYP24A1Q07973 514 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 PSMD6Q15008 389 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 FAM173BQ6P4H8 233 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 EPM2AIP1Q7L775 607 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 CCDC65Q8IXS2 484 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 CHPFQ8IZ52 775 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 GPR174Q9BXC1 333 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 KLF16Q9BXK1 252 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 ASCL3Q9NQ33 180 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 MARK1Q9P0L2 795 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 ADAMTS1Q9UHI8 967 aa12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 EIF2B4Q9UI10 523 aaKnown RBP12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 ARID1BQ8NFD5 2236 aaPredicted RBP12.34□□□□□ -0.43
CACNA1C-228ENST00000492150 CENPEQ02224 2701 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 A0A1B0GTQ1 180 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 NEDD8-MDP1E9PL57 170 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 TBX18O95935 607 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 CISD3P0C7P0 127 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 TYRP14679 529 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 LSSP48449 732 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 INSM1Q01101 510 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 CEBPZQ03701 1054 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 SDE2Q6IQ49 451 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 STXBP4Q6ZWJ1 553 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 ZMIZ2Q8NF64 920 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 ZNF507Q8TCN5 953 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 CCDC127Q96BQ5 260 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 P2RY11Q96G91 374 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 SMOQ99835 787 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 DMAP1Q9NPF5 467 aaPredicted RBP12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 AGPAT3Q9NRZ7 376 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 ATP8B3O60423 1300 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
CACNA1C-228ENST00000492150 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 CBX4O00257 560 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 GFRA2O00451 464 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 CLIC2O15247 247 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 TLR5O60602 858 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 AP1G2O75843 785 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 BEST1O76090 585 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 IGLV3-19P01714 112 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 OXTRP30559 389 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 ATICP31939 592 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 CTSKP43235 329 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 CYP2J2P51589 502 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 GABREP78334 506 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 ORC1Q13415 861 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 TRPC3Q13507 836 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 KIAA1324Q6UXG2 1013 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 TPGS1Q6ZTW0 290 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 FUKQ8N0W3 1084 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 PDILTQ8N807 584 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 SCFD1Q8WVM8 642 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 ELMO3Q96BJ8 720 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 SMARCD1Q96GM5 515 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 VCPIP1Q96JH7 1222 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 ARHGAP9Q9BRR9 750 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 SDCBP2Q9H190 292 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 ZNF768Q9H5H4 540 aaKnown RBP12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 ITM2CQ9NQX7 267 aa12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 MORC2Q9Y6X9 1032 aaPredicted RBP12.32□□□□□ -0.44
CACNA1C-228ENST00000492150 EIF3DO15371 548 aaKnown RBP eCLIP12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 MT-CO3P00414 261 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 MPOP05164 745 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 DGKGP49619 791 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 ERICH6BQ5W0A0 696 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 XXYLT1Q8NBI6 393 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 SYAP1Q96A49 352 aaPredicted RBP12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 NACA2Q9H009 215 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 EPN3Q9H201 632 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 POLR1BQ9H9Y6 1135 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 KRT82Q9NSB4 513 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 KBTBD4Q9NVX7 518 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 OSER1Q9NX31 292 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 FBXO10Q9UK96 956 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 OTOGQ6ZRI0 2925 aa12.31□□□□□ -0.44
CACNA1C-228ENST00000492150 MED13Q9UHV7 2174 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 KCNJ18B7U540 433 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 CCDC130P13994 396 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 CASP4P49662 377 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 E2F1Q01094 437 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 SLC39A14Q15043 492 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 E2F4Q16254 413 aa12.3□□□□□ -0.44
CACNA1C-228ENST00000492150 FUT11Q495W5 492 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms