RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TAF1DQ9H5J8 278 aaPredicted RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 ITM2CQ9NQX7 267 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 NDUFAF4Q9P032 175 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 ARPP21Q9UBL0 812 aaPredicted RBP4.48□□□□□ -1.69
CD46-216ENST00000490278 ZNHIT2Q9UHR6 403 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
CD46-216ENST00000490278 TCRBV5S1A1TA0A578 114 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 H0Y3Z8 333 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 CLIC1O00299 241 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 FYB1O15117 783 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 NKX2-8O15522 239 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 GCATO75600 419 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 ADD2P35612 726 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 PTH2RP49190 550 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 PRKAA2P54646 552 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 KCNB1Q14721 858 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 ADCK5Q3MIX3 580 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 STRIP1Q5VSL9 837 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 TMEM65Q6PI78 240 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 DCDC5Q6ZRR9 648 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 RRAGAQ7L523 313 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 MOGAT3Q86VF5 341 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 ANKRD18AQ8IVF6 992 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 SUGP1Q8IWZ8 645 aaKnown RBP4.47□□□□□ -1.69
CD46-216ENST00000490278 OR6Y1Q8NGX8 325 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 ADAMTS18Q8TE60 1221 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 THAP4Q8WY91 577 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 GCC1Q96CN9 775 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 MECRQ9BV79 373 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 MRIQ9BWK5 157 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 RNF26Q9BY78 433 aaPredicted RBP4.47□□□□□ -1.69
CD46-216ENST00000490278 CDCP1Q9H5V8 836 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 RIOX1Q9H6W3 641 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 SEPSECSQ9HD40 501 aaKnown RBP4.47□□□□□ -1.69
CD46-216ENST00000490278 ABHD10Q9NUJ1 306 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 LIN7CQ9NUP9 197 aaKnown RBP4.47□□□□□ -1.69
CD46-216ENST00000490278 SERGEFQ9UGK8 458 aa4.47□□□□□ -1.69
CD46-216ENST00000490278 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.69
CD46-216ENST00000490278 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 SLC38A8A6NNN8 435 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 POC1B-GALNT4F8VUJ3 575 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 UBE2Q2LH0YL09 131 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 M0QYT0 321 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 PROP1O75360 226 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 C1QL1O75973 258 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 IGLV2-14P01704 120 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 ATF7P17544 494 aaPredicted RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 SERPINA4P29622 427 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 AARSP49588 968 aaKnown RBP eCLIP4.46□□□□□ -1.7
CD46-216ENST00000490278 ELLP55199 621 aaPredicted RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 RPL15P61313 204 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 WDR5P61964 334 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 RBM6P78332 1123 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 CUL4BQ13620 913 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 LARS2Q15031 903 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 TBRG1Q3YBR2 411 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 GALNTL6Q49A17 601 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 ANKRD45Q5TZF3 282 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 WDR93Q6P2C0 686 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 VSTM1Q6UX27 236 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 FTSJ3Q8IY81 847 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 GALNT4Q8N4A0 578 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 BOLLQ8N9W6 283 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 FAM98AQ8NCA5 519 aaKnown RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 SPPL3Q8TCT6 385 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 SDCCAG3Q96C92 435 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 ELOVL1Q9BW60 279 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 SEMA5BQ9P283 1151 aa4.46□□□□□ -1.7
CD46-216ENST00000490278 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.46□□□□□ -1.7
CD46-216ENST00000490278 TRPC5Q9UL62 973 aaPredicted RBP4.46□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3DA0A087WVF3 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3IA0A087WXS9 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3EA0A087X179 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3KA0A087X1G2 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3BA6NDS4 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3FA6NER0 549 aaPredicted RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 TTC34A8MYJ7 566 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 B9A039 149 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3LB9A6J9 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 E7EVH7 732 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 SMIM22K7EJ46 135 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 NUDT3O95989 172 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 SLC3A2P08195 630 aaKnown RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 CHRM5P08912 532 aaPredicted RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3HP0C7X1 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 BMP5P22003 454 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 SLC8A1P32418 973 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 GRK5P34947 590 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 FAM3BP58499 235 aaPredicted RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 TLE3Q04726 772 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 RNASELQ05823 741 aaKnown RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 CNGA3Q16281 694 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 HSP90AB4PQ58FF6 505 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 FCRLBQ6BAA4 426 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3GQ6DHY5 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3CQ6IPX1 549 aa4.45□□□□□ -1.7
CD46-216ENST00000490278 KYAT3Q6YP21 454 aaKnown RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 TBC1D3Q8IZP1 549 aaPredicted RBP4.45□□□□□ -1.7
CD46-216ENST00000490278 CSGALNACT1Q8TDX6 532 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms