RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DPY19L2P1Q6NXN4 242 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 RSRC2Q7L4I2 434 aaKnown RBP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 LPCAT2Q7L5N7 544 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 ENOSF1Q7L5Y1 443 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 TMEM110Q86TL2 294 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 FMNL3Q8IVF7 1028 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 CHPFQ8IZ52 775 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 SIX6OS1Q8N1H7 587 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 MLKLQ8NB16 471 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 RNF139Q8WU17 664 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 HMGB4Q8WW32 186 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 EDEM1Q92611 657 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 TCEAL3Q969E4 200 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 LMLNQ96KR4 655 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 MRGPRX1Q96LB2 322 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 SMOC1Q9H4F8 434 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 ELOVL2Q9NXB9 296 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 SFMBT1Q9UHJ3 866 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 PILRBQ9UKJ0 227 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 PCDHGA4Q9Y5G9 962 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 STON1Q9Y6Q2 735 aa10.15□□□□□ -0.78
TMEM39A-210ENST00000490099 PCNX2A6NKB5 2137 aa10.15□□□□□ -0.79
TMEM39A-210ENST00000490099 IGHV1OR15-9A0A0B4J2B8 117 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 BECN2A8MW95 431 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 WASH3PC4AMC7 463 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 KHNYNO15037 678 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 ZNF217O75362 1048 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 CALCAP01258 141 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 IGLV3-19P01714 112 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 LTFP02788 710 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 HMBSP08397 361 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 NDUFV2P19404 249 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 WASP42768 502 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 HARS2P49590 506 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 RGS7P49802 495 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 IRX4P78413 519 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 NNTQ13423 1086 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 E2F5Q15329 346 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 AASDHQ4L235 1098 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 MPPE1Q53F39 396 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 FAM133BQ5BKY9 247 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 PPM1JQ5JR12 505 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 SDE2Q6IQ49 451 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 TRIM65Q6PJ69 517 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC36A4Q6YBV0 504 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 SYT12Q8IV01 421 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 SCUBE3Q8IX30 993 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 ZNF606Q8WXB4 792 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 BHMTQ93088 406 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 TMA16Q96EY4 203 aaKnown RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC39A13Q96H72 371 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 ZNF419Q96HQ0 510 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 FAM81BQ96LP2 452 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 UBE2TQ9NPD8 197 aaPredicted RBP10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 TMEM74BQ9NUR3 256 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 CACNA2D2Q9NY47 1150 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 CALCOCO1Q9P1Z2 691 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 EPG5Q9HCE0 2579 aa10.14□□□□□ -0.79
TMEM39A-210ENST00000490099 CACNA1EQ15878 2313 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 ASCC3Q8N3C0 2202 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 M0QYV0 167 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 PAPSS1O43252 624 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 SART1O43290 800 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 IGLV3-25P01717 112 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 CYBBP04839 570 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 NCAM1P13591 858 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 LCP1P13796 627 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC9A1P19634 815 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 PON1P27169 355 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 HLA-FP30511 346 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 DPP6P42658 865 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 IL12RB1P42701 662 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 ACADSBP45954 432 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 CAMK4Q16566 473 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 FUT11Q495W5 492 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 LCE2DQ5TA82 110 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 PIK3R6Q5UE93 754 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 DENND1BQ6P3S1 775 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 SLC23A3Q6PIS1 610 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 CYP2U1Q7Z449 544 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 ANKS1BQ7Z6G8 1248 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 ADIPOR2Q86V24 386 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 UNC45BQ8IWX7 931 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 TMEFF1Q8IYR6 380 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 WDTC1Q8N5D0 677 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 CLEC4CQ8WTT0 213 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 DDI1Q8WTU0 396 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 SHC3Q92529 594 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 SPACA7Q96KW9 195 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 FCRL2Q96LA5 508 aaPredicted RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 MKRN2Q9H000 416 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 TMEM245Q9H330 911 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 SIX2Q9NPC8 291 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 ITM2CQ9NQX7 267 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 USP36Q9P275 1121 aaKnown RBP10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 CYTH4Q9UIA0 394 aa10.13□□□□□ -0.79
TMEM39A-210ENST00000490099 TNRC6BQ9UPQ9 1833 aaKnown RBP10.12□□□□□ -0.79
TMEM39A-210ENST00000490099 PATE3B3GLJ2 98 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms