RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 MOV10Q9HCE1 1003 aaKnown RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 PAPOLBQ9NRJ5 636 aaKnown RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 ZNF580Q9UK33 172 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 ZMYND8Q9ULU4 1186 aaPredicted RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 SQORQ9Y6N5 450 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 CCDC187A0A096LP49 1063 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 IGLV5-39A0A0G2JS06 123 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 FAM90A8PA6NJQ4 464 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 ZSCAN9O15535 394 aaPredicted RBP4.41□□□□□ -1.7
HMGN1-218ENST00000490032 DHHO43323 396 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 SGPL1O95470 568 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 ALPLP05186 524 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 FAM90A13PP0C7W8 464 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 FAM90A24PP0C7X0 464 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 EGR1P18146 543 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 STT3AP46977 705 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 NANOS2P60321 138 aaKnown RBP4.41□□□□□ -1.7
HMGN1-218ENST00000490032 DMWDQ09019 674 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 BFSP2Q13515 415 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 KLHL22Q53GT1 634 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 CCDC144NLQ6NUI1 221 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 PIK3AP1Q6ZUJ8 805 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 LAS2Q8IYD9 372 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 CCDC33Q8N5R6 958 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 ASB12Q8WXK4 309 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 CAMK1GQ96NX5 476 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 PCDHAC1Q9H158 963 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 CDCP1Q9H5V8 836 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 GJB4Q9NTQ9 266 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 PCDHA12Q9UN75 941 aa4.41□□□□□ -1.7
HMGN1-218ENST00000490032 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 A0A0G2JK05 382 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 APOL1O14791 398 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 CTIFO43310 598 aaKnown RBP4.4□□□□□ -1.71
HMGN1-218ENST00000490032 EPN2O95208 641 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 SLC3A2P08195 630 aaKnown RBP4.4□□□□□ -1.71
HMGN1-218ENST00000490032 IDEP14735 1019 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 IL6STP40189 918 aaPredicted RBP4.4□□□□□ -1.71
HMGN1-218ENST00000490032 ELF2Q15723 593 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 MIDNQ504T8 468 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 GLE1Q53GS7 698 aaKnown RBP4.4□□□□□ -1.71
HMGN1-218ENST00000490032 RUSC1-AS1Q66K80 236 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 PELI3Q8N2H9 469 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 SLC44A5Q8NCS7 719 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 WASF1Q92558 559 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 MSI2Q96DH6 328 aaKnown RBP4.4□□□□□ -1.71
HMGN1-218ENST00000490032 LYZL4Q96KX0 146 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 SARGQ9BW04 601 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 TTLL2Q9BWV7 592 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 ERVK-5Q9HDB9 667 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 STARD7Q9NQZ5 370 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 AGO2Q9UKV8 859 aaKnown RBP4.4□□□□□ -1.71
HMGN1-218ENST00000490032 EMSYQ7Z589 1322 aa4.4□□□□□ -1.71
HMGN1-218ENST00000490032 GXYLT2A0PJZ3 443 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 M0QZQ0 153 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 NDST3O95803 873 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 VIPP01282 170 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 ENO1P06733 434 aaKnown RBP4.39□□□□□ -1.71
HMGN1-218ENST00000490032 PECAM1P16284 738 aaPredicted RBP4.39□□□□□ -1.71
HMGN1-218ENST00000490032 STAT6P42226 847 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 GSTM5P46439 218 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 ALDH7A1P49419 539 aaKnown RBP4.39□□□□□ -1.71
HMGN1-218ENST00000490032 AGTR2P50052 363 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 HTR6P50406 440 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 IFIT5Q13325 482 aaKnown RBP4.39□□□□□ -1.71
HMGN1-218ENST00000490032 MAPKAPK3Q16644 382 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 MANEAQ5SRI9 462 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 MEPCEQ7L2J0 689 aaKnown RBP4.39□□□□□ -1.71
HMGN1-218ENST00000490032 GLIS1Q8NBF1 620 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 GRAMD1AQ96CP6 724 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 PIMREGQ9BSJ6 248 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 RGL1Q9NZL6 768 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 MSRB1Q9NZV6 116 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 MAN2B2Q9Y2E5 1009 aa4.39□□□□□ -1.71
HMGN1-218ENST00000490032 ZNF335Q9H4Z2 1342 aaPredicted RBP4.39□□□□□ -1.71
HMGN1-218ENST00000490032 EVPLQ92817 2033 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 PRPF4O43172 522 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1-218ENST00000490032 SMAD6O43541 496 aaKnown RBP4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ATG13O75143 517 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ALADP13716 330 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 SLC8A1P32418 973 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 NSUN2Q08J23 767 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1-218ENST00000490032 SAFBQ15424 915 aaKnown RBP eCLIP4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ARHGAP15Q53QZ3 475 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 COBLL1Q53SF7 1204 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 DAB2IPQ5VWQ8 1189 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 LVRNQ6Q4G3 990 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ZNF474Q6S9Z5 364 aaPredicted RBP4.38□□□□□ -1.71
HMGN1-218ENST00000490032 RHPN2Q8IUC4 686 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ADGRF4Q8IZF3 695 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ZFPM2Q8WW38 1151 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 BRI3BPQ8WY22 251 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 KAT2BQ92831 832 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 PMM1Q92871 262 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 SLC25A28Q96A46 364 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 NLRP4Q96MN2 994 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 TBCBQ99426 244 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 PAAF1Q9BRP4 392 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 ELOVL1Q9BW60 279 aa4.38□□□□□ -1.71
HMGN1-218ENST00000490032 KCNK9Q9NPC2 374 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms