RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 PTPN18Q99952 460 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 FERMT1Q9BQL6 677 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 B3GNT5Q9BYG0 378 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 ECT2Q9H8V3 914 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 XAB2Q9HCS7 855 aaKnown RBP9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 KLC4Q9NSK0 619 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SLC38A7Q9NVC3 462 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 GJD2Q9UKL4 321 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 TTLL3Q9Y4R7 772 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 IPPQ9Y573 584 aa9.9□□□□□ -0.82
RAB3GAP1-205ENST00000489858 SF3B1O75533 1304 aaKnown RBP eCLIP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 A0A1W2PPM1 405 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TCRBV9S1A1TA0A576 114 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 HCRTO43612 131 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 KPNA6O60684 536 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 EDF1O60869 148 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 GCATO75600 419 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 DCTN3O75935 186 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TROVE2P10155 538 aaKnown RBP eCLIP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 NPR3P17342 541 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 KRT4P19013 534 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 ALDH3A1P30838 453 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 HOXC8P31273 242 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FDFT1P37268 417 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 MATKP42679 507 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 NCALDP61601 193 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SARNPP82979 210 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 ADIGQ0VDE8 80 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 DNAJC3Q13217 504 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SETDB1Q15047 1291 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TAF1CQ15572 869 aaPredicted RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SLC1A5Q15758 541 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SNCBQ16143 134 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FSCN1Q16658 493 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TUSC1Q2TAM9 212 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 GALNTL6Q49A17 601 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LGSNQ5TDP6 509 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TTC39BQ5VTQ0 682 aaPredicted RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 HEATR6Q6AI08 1181 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TWF2Q6IBS0 349 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TAF2Q6P1X5 1199 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CYB5D1Q6P9G0 228 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LVRNQ6Q4G3 990 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FUKQ8N0W3 1084 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SIX6OS1Q8N1H7 587 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SMG8Q8ND04 991 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 ARMC2Q8NEN0 867 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CLEC4CQ8WTT0 213 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TMEM40Q8WWA1 233 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CSPG4P5Q96PW8 444 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LPIN3Q9BQK8 851 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 MED10Q9BTT4 135 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 DUSP16Q9BY84 665 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 POPDC2Q9HBU9 364 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LRRC4Q9HBW1 653 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TXLNGQ9NUQ3 528 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 ZC3H7BQ9UGR2 993 aaKnown RBP9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 STAP1Q9ULZ2 295 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 PHTF1Q9UMS5 762 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TRPV2Q9Y5S1 764 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 USH1CQ9Y6N9 552 aa9.89□□□□□ -0.83
RAB3GAP1-205ENST00000489858 A0A0A0MRY4 1105 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CYB561D2O14569 222 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TRDMT1O14717 391 aaKnown RBP9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LPXNO60711 386 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 KRT37O76014 449 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FBXO21O94952 628 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 APRTP07741 180 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FAM200BP0CF97 657 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 PTPN1P18031 435 aaKnown RBP9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LMO2P25791 158 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 TKTP29401 623 aaKnown RBP9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 NOS2P35228 1153 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SKIV2L2P42285 1042 aaKnown RBP9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 NRLP54845 237 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 LILRA4P59901 499 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 MRPS6P82932 125 aaKnown RBP9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 BEX3Q00994 111 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 GBE1Q04446 702 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SOX4Q06945 474 aaPredicted RBP9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 BNIP1Q12981 228 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SEMA5AQ13591 1074 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SLC25A52Q3SY17 297 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 KBTBD12Q3ZCT8 623 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FAXCQ5TGI0 409 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 NCBP2-AS2Q69YL0 99 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 KCNT2Q6UVM3 1135 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 RSPH3Q86UC2 560 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 PIGZQ86VD9 579 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 FAM228AQ86W67 206 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 SLC26A11Q86WA9 606 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CHSY1Q86X52 802 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 IGDCC3Q8IVU1 814 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 DEFB106AQ8N104 65 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CCDC185Q8N715 623 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 BANPQ8N9N5 519 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 CCDC110Q8TBZ0 833 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 ZNF398Q8TD17 642 aa9.88□□□□□ -0.83
RAB3GAP1-205ENST00000489858 PPP1R13LQ8WUF5 828 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms