RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 C3orf70A6NLC5 250 aaPredicted RBP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 LINC01548A6NM66 108 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FAM90A9PA6NNJ1 464 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FAM90A5PA8MXJ8 464 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FYB1O15117 783 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 NKX2-8O15522 239 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 USP12O75317 370 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 PPFIA2O75334 1257 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 RNF8O76064 485 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 MBPP02686 304 aaPredicted RBP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FAM90A15PP0C7V4 464 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 FAM90A14PP0C7W9 464 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 VEGFAP15692 232 aaPredicted RBP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 THBS4P35443 961 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 CCT5P48643 541 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 TLE3Q04726 772 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 SF3A3Q12874 501 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 SLC10A2Q12908 348 aaPredicted RBP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 AAK1Q2M2I8 961 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 OR4N4Q8N0Y3 316 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 ADPRHL1Q8NDY3 354 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 SRFBP1Q8NEF9 429 aaKnown RBP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 OR6Y1Q8NGX8 325 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 HMGB4Q8WW32 186 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 RUBCNQ92622 972 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 AKAP1Q92667 903 aaKnown RBP eCLIP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 SORBS1Q9BX66 1292 aaKnown RBP6.42□□□□□ -1.38
VPS26A-206ENST00000489794 BRD8Q9H0E9 1235 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 R3HDMLQ9H3Y0 253 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 PCDHB2Q9Y5E7 798 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 AOX1Q06278 1338 aa6.42□□□□□ -1.38
VPS26A-206ENST00000489794 ARHGEF17Q96PE2 2063 aaPredicted RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 MBD3L5A6NJ08 208 aaPredicted RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 SMIM22K7EJ46 135 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 PRKCGP05129 697 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 DHRS4L1P0CG22 281 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 ALADP13716 330 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 SLC8A1P32418 973 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 PTH2RP49190 550 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 ARL4CP56559 192 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 RBM6P78332 1123 aaKnown RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 RPS6KA2Q15349 733 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 PFKFB3Q16875 520 aaPredicted RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 TTC22Q5TAA0 569 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 RANBP10Q6VN20 620 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 PNLDC1Q8NA58 520 aaKnown RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 NPIPB3Q92617 1050 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 PRR11Q96HE9 360 aaPredicted RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 RITA1Q96K30 269 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 SEMA4CQ9C0C4 833 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 PRDM13Q9H4Q3 707 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 ELAC1Q9H777 363 aaKnown RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 SEPSECSQ9HD40 501 aaKnown RBP6.41□□□□□ -1.38
VPS26A-206ENST00000489794 C11orf21Q9P2W6 132 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 DAPP1Q9UN19 280 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 VPS4AQ9UN37 437 aa6.41□□□□□ -1.38
VPS26A-206ENST00000489794 HMX3A6NHT5 357 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 LRRC3CA6NJW4 275 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 KIF28PB7ZC32 967 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 IPO5O00410 1097 aaKnown RBP6.4□□□□□ -1.38
VPS26A-206ENST00000489794 PPP6R2O75170 966 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 GYS1P13807 737 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 HSD3B1P14060 373 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 ATF7P17544 494 aaPredicted RBP6.4□□□□□ -1.38
VPS26A-206ENST00000489794 PNLIPRP1P54315 467 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 PPFIA1Q13136 1202 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 BTBD16Q32M84 506 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 ADCK5Q3MIX3 580 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 CC2D1BQ5T0F9 858 aaKnown RBP6.4□□□□□ -1.38
VPS26A-206ENST00000489794 KIAA1614Q5VZ46 1190 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 ANKRD40Q6AI12 368 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 JMJD6Q6NYC1 403 aaPredicted RBP6.4□□□□□ -1.38
VPS26A-206ENST00000489794 TMEM88Q6PEY1 159 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 ZNF788Q6ZQV5 615 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 CHSY1Q86X52 802 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 OR1N1Q8NGS0 311 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 THAP4Q8WY91 577 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 TRAPPC9Q96Q05 1148 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 SENP7Q9BQF6 1050 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 FAM167BQ9BTA0 163 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 VPS16Q9H269 839 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 KIF17Q9P2E2 1029 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 BAG5Q9UL15 447 aa6.4□□□□□ -1.38
VPS26A-206ENST00000489794 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.39□□□□□ -1.39
VPS26A-206ENST00000489794 SLC38A8A6NNN8 435 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 PRRT4C9JH25 899 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 PIP5K1CO60331 668 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 FAM155BO75949 473 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 ALDOAP04075 364 aaKnown RBP6.39□□□□□ -1.39
VPS26A-206ENST00000489794 CYP3A4P08684 503 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 CERS1P27544 350 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 SERPINA4P29622 427 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 GRK5P34947 590 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 HOXD12P35452 270 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 POSTNQ15063 836 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 C16orf89Q6UX73 402 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 LDHAL6AQ6ZMR3 332 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 ZNF813Q6ZN06 617 aa6.39□□□□□ -1.39
VPS26A-206ENST00000489794 ANKRD18AQ8IVF6 992 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms